Academic

Stacy Malaker

Chemistry · 0000-0003-2382-5067 · Yale University

Citations received by year

Google Scholar profile

Citations received in each calendar year across this verified Scholar profile. Bars are annual counts; missing years are unknown. 2026 is an incomplete calendar year.

Publications

79 rows, 7 from the Scholar profile only, 7 need review

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2026 Adipocyte Expression of O-Glycoprotein Procollagen C-Endopeptidase Enhancer Protein 2 (PCPE2): Mechanisms Linking Fibrosis and Beiging of White Adipose Tissue bioRxiv, 2026.07 article CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title scholar	Adipocyte Expression of O-Glycoprotein Procollagen C-Endopeptidase Enhancer Protein 2 (PCPE2): Mechanisms Linking Fibrosis and Beiging of White Adipose Tissue	Adipocyte Expression of O-Glycoprotein Procollagen C-Endopeptidase Enhancer Protein 2 (PCPE2): Mechanisms Linking Fibrosis and Beiging of White Adipose Tissue
year scholar	2026	2026
venue scholar	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind scholar	working_paper	other
DOI openalex	10.64898/2026.07.24.740318
preprint DOI	10.64898/2026.07.24.740318
first author scholar	Beg	Sorci-Thomas

Citations

OpenAlex: 0
Scholar: none
DOI: 10.64898/2026.07.24.740318
OpenAlex: W7171466761

Match decisions

preprint merged · 1.00 · Run 18

2026 Characterization of O-glycoproteases for Applications in Mass Spectrometry Methods in Enzymology chapter CV OA GS

CV span

lines 91–93 · CV · published

9166. Alexandra D. Steigmeyer‡, Joann Chongsaritsinsuk‡, and Stacy A. Malaker*. Characterization of O-glycoproteases92for Applications in Mass Spectrometry. In: Stacy A. Malaker (ed) Methods in Enzymology: Mucins. Elsevier, 202693doi.org/10.1016/bs.mie.2026.03.004

Institution fields

Peer reviewed: yes
First author: Steigmeyer
Co-authors: Alexandra D. Steigmeyer‡; Joann Chongsaritsinsuk‡; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: Elsevier
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Characterization of O-glycoproteases for Applications in Mass Spectrometry	Characterization of O-glycoproteases for applications in mass spectrometry	Characterization of O-glycoproteases for applications in mass spectrometry
year cv	2026	2026	2026
venue crossref	Methods in Enzymology: Mucins	Methods in enzymology on CD-ROM/Methods in enzymology	Methods in enzymology	Methods in Enzymology
kind cv	chapter	chapter	other
DOI cv	10.1016/bs.mie.2026.03.004	10.1016/bs.mie.2026.03.004
first author openalex	Steigmeyer	Steigmeyer	Steigmeyer

Citations

OpenAlex: 0
Scholar: none
DOI: 10.1016/bs.mie.2026.03.004
OpenAlex: W7148258499

Match decisions

doi merged · 1.00 · Run 18

2026 Enrichment Strategies for Mucin-domain O-glycoproteins Methods in Enzymology chapter CV OA GS

CV span

lines 95–96 · CV · published

9565. Shane M. Finn and Stacy A. Malaker*. Enrichment Strategies for Mucin-domain O-glycoproteins. In: Stacy A.96Malaker (ed) Methods in Enzymology: Mucins. Elsevier, 2026. doi.org/10.1016/bs.mie.2026.03.003.

Institution fields

Peer reviewed: yes
First author: Finn
Co-authors: Shane M. Finn; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: Elsevier
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Enrichment Strategies for Mucin-domain O-glycoproteins	Enrichment strategies for mucin-domain O-glycoproteins	Enrichment strategies for mucin-domain O-glycoproteins
year cv	2026	2026	2026
venue crossref	Methods in Enzymology: Mucins	Methods in enzymology on CD-ROM/Methods in enzymology	Methods in enzymology	Methods in Enzymology
kind cv	chapter	chapter	other
DOI cv	10.1016/bs.mie.2026.03.003	10.1016/bs.mie.2026.03.003
first author openalex	Finn	Finn	Finn

Citations

OpenAlex: 0
Scholar: none
DOI: 10.1016/bs.mie.2026.03.003
OpenAlex: W7149036636

Match decisions

doi merged · 1.00 · Run 18

2026 Glycosite Mapping and in situ Imaging of MUC2 Glycopeptides via On- slide Digestion with Mucinase StcE Nature Communications article CV OA GS

CV span

lines 86–89 · CV · published

8667. Sarah C. Lowery, Mikaela Ribi, Joann Chongsaritsinsuk, Isabella P. Tran, Grace Grimsley, Rachel Stubler, Keira E.87Mahoney, Taryn M. Lucas, Georgia Charkoftaki, Alvaro Santos-Neto, Nissi Varki, Vasilis Vasiliou, Michael Angelo,88Richard R. Drake, and Stacy A. Malaker*. Glycosite Mapping and in situ Imaging of MUC2 Glycopeptides via On-89slide Digestion with Mucinase StcE. 2026, Nature Communications. In Press. doi.org/10.1038/s41467-026-72853-3

Institution fields

Peer reviewed: yes
First author: Lowery
Co-authors: Sarah C. Lowery; Mikaela Ribi; Joann Chongsaritsinsuk; Isabella P. Tran; Grace Grimsley; Rachel Stubler; Keira E. Mahoney; Taryn M. Lucas; Georgia Charkoftaki; Alvaro Santos-Neto; Nissi Varki; Vasilis Vasiliou; Michael Angelo; Richard R. Drake; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Glycosite Mapping and in situ Imaging of MUC2 Glycopeptides via On- slide Digestion with Mucinase StcE	Glycosite Mapping and in situ Mass Spectrometry Imaging of MUC2 Glycopeptides via On-slide Digestion with Mucinase StcE	Glycosite mapping and in situ mass spectrometry imaging of MUC2 glycopeptides via on-slide mucinase digestion
year crossref	2026	2024	2026
venue crossref	Nature Communications	bioRxiv (Cold Spring Harbor Laboratory)	Nature Communications
kind cv	article	working_paper	other
DOI cv	10.1038/s41467-026-72853-3	10.1101/2024.09.16.613285
preprint DOI openalex		10.1101/2024.09.16.613285
first author cv	Lowery	Lowery	Lowery

Citations

OpenAlex: 3
Scholar: 6
DOI: 10.1038/s41467-026-72853-3
OpenAlex: W4402663993

Match decisions

preprint merged · 1.00 · Run 18

2026 Impaired glycosylation promotes rapid transition to hepatocellular carcinoma in model of diet-induced steatotic liver disease Journal of Clinical Investigation article journal CV OA GS

CV span

lines 98–103 · CV · published

9864. Abhishek K. Singh, Balkrishna Chaube, Kathryn M. Citrin, Joseph Wayne Fowler, Sungwoon Lee, Jonatas Catarino,99James Knight, Sarah C. Lowery, Sonal Shree, Keira E. Mahoney, Nabil Boutagy, Inmaculada Ruz-Maldonado, Kathy100Harry, Marya Shanabrough, Trenton Thomas Ross, Stacy A. Malaker, Yajaira Suárez, Carlos Fernández-Hernando,101Kariona Grabinska, and William C. Sessa. Impaired glycosylation promotes rapid transition to hepatocellular102carcinoma in model of diet-induced steatotic liver disease. 2026, Journal of Clinical Investigation. In Press.103doi.org/10.1172/JCI197719.

Institution fields

Peer reviewed: yes
First author: Singh
Co-authors: Abhishek K. Singh; Balkrishna Chaube; Kathryn M. Citrin; Joseph Wayne Fowler; Sungwoon Lee; Jonatas Catarino; James Knight; Sarah C. Lowery; Sonal Shree; Keira E. Mahoney; Nabil Boutagy; Inmaculada Ruz-Maldonado; Kathy Harry; Marya Shanabrough; Trenton Thomas Ross; Stacy A. Malaker; Yajaira Suárez; Carlos Fernández-Hernando; Kariona Grabinska; William C. Sessa
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Impaired glycosylation promotes rapid transition to hepatocellular carcinoma in model of diet-induced steatotic liver disease	Impaired glycosylation promotes rapid transition to hepatocellular carcinoma in model of diet-induced steatotic liver disease	Impaired glycosylation promotes rapid transition to hepatocellular carcinoma in model of diet-induced steatotic liver disease
year crossref	2026	2026	2026
venue crossref	Journal of Clinical Investigation	Journal of Clinical Investigation	The Journal of Clinical Investigation
kind cv	article	article	other
DOI cv	10.1172/jci197719	10.1172/jci197719
first author openalex	Singh	Singh	Singh

Citations

OpenAlex: 1
Scholar: 1
DOI: 10.1172/jci197719
OpenAlex: W7134910886

Match decisions

doi merged · 1.00 · Run 18

2026 O-Glycosylation Shapes the Proteolytic Landscape of the Native Tear Peptidome JACS Au article journal CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title openalex	O-Glycosylation Shapes the Proteolytic Landscape of the Native Tear Peptidome	O-Glycosylation Shapes the Proteolytic Landscape of the Native Tear Peptidome
year openalex	2026	2026
venue openalex	JACS Au	JACS Au
kind openalex	article	other
DOI openalex	10.1021/jacsau.6c00834
first author openalex	Chang	Chang

Citations

OpenAlex: 0
Scholar: 2
DOI: 10.1021/jacsau.6c00834
OpenAlex: W7165574621

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1021/jacsau.6c00834 for the JACS Au publication.

2026 Xylosyltransferase engineering to manipulate proteoglycans in mammalian cells Nature Chemical Biology article journal CV OA GS

CV span

lines 105–110 · CV · published

10563. Zhen Li, Lucia Di Vagno, Aisling Ni Cheallaigh, Meg Critcher, Douglas Sammon, Edgar Gonzalez-Rodriguez, David106C. Briggs, Nara Chung, Vincent Chang, Keira E. Mahoney, Anna Cioce, Ganka Bineva-Todd, Pei-Ying Wang, Yi-107Chang Liu , Lloyd D. Murphy, Yen-Hsi Chen, Yoshiki Narimatsu, Rebecca L. Miller, Lianne I. Willems, Stacy A.108Malaker, Mia L Huang, Gavin J. Miller, Erhard Hohenester, and Benjamin Schumann. Xylosyltransferase109engineering to manipulate proteoglycans in mammalian cells. 2026, Nature Chemical Biology, 22: 612–621.110doi.org/10.1038/s41589-025-02113-w

Institution fields

Peer reviewed: yes
First author: Li
Co-authors: Zhen Li; Lucia Di Vagno; Aisling Ni Cheallaigh; Meg Critcher; Douglas Sammon; Edgar Gonzalez-Rodriguez; David C. Briggs; Nara Chung; Vincent Chang; Keira E. Mahoney; Anna Cioce; Ganka Bineva-Todd; Pei-Ying Wang; Yi- Chang Liu; Lloyd D. Murphy; Yen-Hsi Chen; Yoshiki Narimatsu; Rebecca L. Miller; Lianne I. Willems; Stacy A. Malaker; Mia L Huang; Gavin J. Miller; Erhard Hohenester; Benjamin Schumann
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Xylosyltransferase engineering to manipulate proteoglycans in mammalian cells	Xylosyltransferase engineering to manipulate proteoglycans in mammalian cells	Xylosyltransferase engineering to manipulate proteoglycans in mammalian cells
year cv	2026	2026	2026
venue crossref	Nature Chemical Biology	Nature Chemical Biology	Nature Chemical Biology
kind cv	article	article	other
DOI cv	10.1038/s41589-025-02113-w	10.1038/s41589-025-02113-w
first author openalex	Li	Li	Li

Citations

OpenAlex: 3
Scholar: 3
DOI: 10.1038/s41589-025-02113-w
OpenAlex: W7124857757

Match decisions

doi merged · 1.00 · Run 18

2025 An ultrasensitive and modulator platform to detect Siglec ligands and modulate immune cell function Science Advances article journal CV OA GS

CV span

lines 112–117 · CV · published

11262. Zeinab Jame-Chenarboo, Edward N. Schmidt, Madeline Crichton, Kei Takahashi-Yamashiro, Guilherme M. Lima,113Liany Luna Dulcey, Jaesoo Jung, Sabine Ivison, Chris D. St. Laurent, Jhon Enteria, Sung-Yao Lin, Susmita Sarkar,114Maju Joe, Fahima Mozaneh, Reni John, Som G. Nanjappa, Stacy A. Malaker, Megan K. Levings, Jamey D. Marth,115116Ratmir Derda, and Matthew S. Macauley. An ultrasensitive and modulator platform to detect Siglec ligands and117modulate immune cell function. 2025, Science Advances, 11(46): eadz8096. doi.org/10.1126/sciadv.adz8096.

Institution fields

Peer reviewed: yes
First author: Jame-Chenarboo
Co-authors: Zeinab Jame-Chenarboo; Edward N. Schmidt; Madeline Crichton; Kei Takahashi-Yamashiro; Guilherme M. Lima; Liany Luna Dulcey; Jaesoo Jung; Sabine Ivison; Chris D. St. Laurent; Jhon Enteria; Sung-Yao Lin; Susmita Sarkar; Maju Joe; Fahima Mozaneh; Reni John; Som G. Nanjappa; Stacy A. Malaker; Megan K. Levings; Jamey D. Marth; Ratmir Derda; Matthew S. Macauley
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	An ultrasensitive and modulator platform to detect Siglec ligands and modulate immune cell function	An ultrasensitive and modular platform to detect Siglec ligands and control immune cell functionAn ultrasensitive and modular platform to detect Siglec ligands and control immune cell function	An ultrasensitive and modular platform to detect Siglec ligands and control immune cell function
year cv	2025	20252025	2025
venue crossref	Science Advances	bioRxiv (Cold Spring Harbor Laboratory)Science Advances	Science Advances
kind cv	article	working_paperarticle	other
DOI cv	10.1126/sciadv.adz8096	10.1101/2025.06.10.65868410.1126/sciadv.adz8096
preprint DOI openalex		10.1101/2025.06.10.658684
first author openalex	Jame-Chenarboo	Jame-ChenarbooJame-Chenarboo	Jame-Chenarboo

Citations

OpenAlex: 4
Scholar: 5
DOI: 10.1126/sciadv.adz8096
OpenAlex: W4416203180

Match decisions

doi merged · 1.00 · Run 18

2025 Decoding Extracellular Protein Glycosylation in Human Health and Disease Annual Review of Analytical Chemistry review journal CV OA GS

CV span

lines 150–152 · CV · published

15055. Invited review: Alexandra D. Steigmeyer‡, Sarah C. Lowery‡, Valentina Rangel-Angarita, and Stacy A. Malaker*.151Decoding Extracellular Protein Glycosylation in Human Health and Disease. Annual Reviews in Analytical Chemistry.1522025, Vol 18. doi.org/10.1146/annurev-anchem-071024-124203

Institution fields

Peer reviewed: yes
First author: Steigmeyer
Co-authors: Alexandra D. Steigmeyer‡; Sarah C. Lowery‡; Valentina Rangel-Angarita; Stacy A. Malaker*
Subfield: other
Method: review
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Decoding Extracellular Protein Glycosylation in Human Health and Disease	Decoding Extracellular Protein Glycosylation in Human Health and Disease	Decoding extracellular protein glycosylation in human health and disease
year cv	2025	2025	2025
venue crossref	Annual Reviews in Analytical Chemistry	Annual Review of Analytical Chemistry	Annual Review of Analytical Chemistry	Annual Review of Analytical Chemistry
kind cv	review	review	other
DOI cv	10.1146/annurev-anchem-071024-124203	10.1146/annurev-anchem-071024-124203
first author openalex	Steigmeyer	Steigmeyer	Steigmeyer

Citations

OpenAlex: 10
Scholar: 16
DOI: 10.1146/annurev-anchem-071024-124203
OpenAlex: W4406411401

Match decisions

doi merged · 1.00 · Run 18

2025 GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis Analytical Chemistry article journal CV OA GS

CV span

lines 119–121 · CV · published

11961. Shane M. Finn, Keira E. Mahoney, Taryn M. Lucas, Valentina Rangel-Angarita, Ryan J. Chen, and Stacy A.120Malaker*. GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis. 2025,121Analytical Chemistry. 97(43): 23751–23756. doi.org/10.1021/acs.analchem.5c02666

Institution fields

Peer reviewed: yes
First author: Finn
Co-authors: Shane M. Finn; Keira E. Mahoney; Taryn M. Lucas; Valentina Rangel-Angarita; Ryan J. Chen; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis	GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic AnalysisGlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis	GlycoFASP: A Universal Method to Prepare Complex Mixtures for O-Glycoproteomic Analysis
year cv	2025	20252025	2025
venue crossref	Analytical Chemistry	ChemRxivAnalytical Chemistry	Analytical Chemistry
kind cv	article	working_paperarticle	other
DOI cv	10.1021/acs.analchem.5c02666	10.26434/chemrxiv-2025-bxv0k10.1021/acs.analchem.5c02666
preprint DOI openalex		10.26434/chemrxiv-2025-bxv0k
first author openalex	Finn	FinnFinn	Finn

Citations

OpenAlex: 5
Scholar: 11
OpenAlex with related records: 6
DOI: 10.1021/acs.analchem.5c02666
OpenAlex: W4415507615

Match decisions

doi merged · 1.00 · Run 18

2025 Glycoproteoforms of osteoarthritis-associated lubricin in plasma and synovial fluid Molecular & Cellular Proteomics article journal CV OA GS

CV span

lines 143–148 · CV · published

14356. Invited article for “Celebrating the Career of Donald F. Hunt”: Ali Reza Afshari‡, Vincent144Chang‡, Kristina A. Thomsson, Jennifer Höglund, Ellie Browne, George Karadzhov, Keira E. Mahoney, Taryn M.145Lucas, Valentina Rangel-Angarita, Henrik Ryberg, Kamlesh Gidwani, Kim Pettersson, Ola Rolfson, Lena I Björkman,146Thomas Eisler, Tannin A. Schmidt, Gregory D. Jay, Stacy A. Malaker*, and Niclas G. Karlsson*. Glycoproteoforms147of osteoarthritis-associated lubricin in plasma and synovial fluid. Molecular and Cellular Proteomics. 2025, 6:100923.148doi: 10.1016/j.mcpro.2025.100923.

Institution fields

Peer reviewed: yes
First author: Afshari
Co-authors: Ali Reza Afshari‡; Vincent Chang‡; Kristina A. Thomsson; Jennifer Höglund; Ellie Browne; George Karadzhov; Keira E. Mahoney; Taryn M. Lucas; Valentina Rangel-Angarita; Henrik Ryberg; Kamlesh Gidwani; Kim Pettersson; Ola Rolfson; Lena I Björkman; Thomas Eisler; Tannin A. Schmidt; Gregory D. Jay; Stacy A. Malaker*; Niclas G. Karlsson*
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Glycoproteoforms of osteoarthritis-associated lubricin in plasma and synovial fluid	Glycoproteoforms of Osteoarthritis-associated Lubricin in Plasma and Synovial Fluid	Glycoproteoforms of Osteoarthritis-associated Lubricin in Plasma and Synovial Fluid
year cv	2025	2025	2025
venue crossref	Molecular and Cellular Proteomics	Molecular & Cellular Proteomics	Molecular & Cellular Proteomics	Molecular & Cellular Proteomics
kind cv	article	article	other
DOI cv	10.1016/j.mcpro.2025.100923	10.1016/j.mcpro.2025.100923
first author openalex	Afshari	Afshari	Afshari

Citations

OpenAlex: 11
Scholar: 13
DOI: 10.1016/j.mcpro.2025.100923
OpenAlex: W4407204648

Match decisions

doi merged · 1.00 · Run 18

2025 Identification of post- translationally modified MHC class I-associated peptides as potential cancer immunotherapeutic targets Molecular & Cellular Proteomics article journal CV OA GS

CV span

lines 127–130 · CV · published

12759. Invited article for “Celebrating the Career of Donald F. Hunt”: Keira E. Mahoney, Larry Reser, Maria Virginia Ruiz128Cuevas, Jennifer G. Abelin, Jeffrey Shabanowitz, Donald F. Hunt*, and Stacy A. Malaker*. Identification of post-129translationally modified MHC class I-associated peptides as potential cancer immunotherapeutic targets. Molecular130and Cellular Proteomics, 2025, 24(8): 100971. doi.org/10.1016/j.mcpro.2025.100971

Institution fields

Peer reviewed: yes
First author: Mahoney
Co-authors: Keira E. Mahoney; Larry Reser; Maria Virginia Ruiz Cuevas; Jennifer G. Abelin; Jeffrey Shabanowitz; Donald F. Hunt*; Stacy A. Malaker*
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Identification of post- translationally modified MHC class I-associated peptides as potential cancer immunotherapeutic targets	Identification of Post-translationally Modified MHC Class I–Associated Peptides as Potential Cancer Immunotherapeutic Targets	Identification of Post-translationally Modified MHC Class I–Associated Peptides as Potential Cancer Immunotherapeutic Targets
year cv	2025	2025	2025
venue crossref	Molecular and Cellular Proteomics	Molecular & Cellular Proteomics	Molecular & Cellular Proteomics	Molecular & Cellular Proteomics
kind cv	article	article	other
DOI cv	10.1016/j.mcpro.2025.100971	10.1016/j.mcpro.2025.100971
first author openalex	Mahoney	Mahoney	Mahoney

Citations

OpenAlex: 9
Scholar: 11
DOI: 10.1016/j.mcpro.2025.100971
OpenAlex: W4409423200

Match decisions

doi merged · 1.00 · Run 18

2025 In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms Journal of Biological Chemistry article journal CV OA GS

CV span

lines 123–125 · CV · published

12360. Vincent Chang, Keira E. Mahoney, Isaac Lian, Ryan Chen, Nara Chung, Tor Paaske Utheim, Niclas G. Karlsson, and124Stacy A. Malaker*. In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and125spliceoforms. Journal of Biological Chemistry. 2025, 301(9): 110580. doi.org/10.1016/j.jbc.2025.110580

Institution fields

Peer reviewed: yes
First author: Chang
Co-authors: Vincent Chang; Keira E. Mahoney; Isaac Lian; Ryan Chen; Nara Chung; Tor Paaske Utheim; Niclas G. Karlsson; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms	In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoformsIn-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms	In-depth analysis of the tear fluid glycoproteome reveals diverse lacritin glycosylation and spliceoforms
year cv	2025	20252025	2025
venue crossref	Journal of Biological Chemistry	bioRxiv (Cold Spring Harbor Laboratory)Journal of Biological Chemistry	Journal of Biological Chemistry
kind cv	article	working_paperarticle	other
DOI cv	10.1016/j.jbc.2025.110580	10.1101/2025.06.13.65958910.1016/j.jbc.2025.110580
preprint DOI openalex		10.1101/2025.06.13.659589
first author openalex	Chang	ChangChang	Chang

Citations

OpenAlex: 7
Scholar: 13
OpenAlex with related records: 9
DOI: 10.1016/j.jbc.2025.110580
OpenAlex: W4413100817

Match decisions

doi merged · 1.00 · Run 18

2025 PNGaseF-generated N-glycans adduct onto peptides in the gas phase Journal of the American Society for Mass Spectrometry article journal CV OA GS

CV span

lines 137–141 · CV · published

13757. Valentina Rangel-Angarita, Joann Chongsaritsinsuk, Keira E. Mahoney, Lea M. Kim, Ryan J.138Chen, Akua A. Appah-Sampong, Isabella P. Tran, Alexandra D. Steigmeyer, Marie A.139Hollenhorst, and Stacy A. Malaker*. PNGaseF-generated N-glycans adduct onto peptides140in the gas phase. Journal for the American Society of Mass Spectrometry. 2025, 36 (3):141542-552. doi.org/10.1021/jasms.4c00431. Selected as supplemental cover, see right.

Institution fields

Peer reviewed: yes
First author: Rangel-Angarita
Co-authors: Valentina Rangel-Angarita; Joann Chongsaritsinsuk; Keira E. Mahoney; Lea M. Kim; Ryan J. Chen; Akua A. Appah-Sampong; Isabella P. Tran; Alexandra D. Steigmeyer; Marie A. Hollenhorst; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	PNGaseF-generated N-glycans adduct onto peptides in the gas phase	PNGaseF-generated N-glycans adduct onto peptides in the gas phasePNGaseF-Generated N-Glycans Adduct onto Peptides in the Gas Phase	PNGaseF-generated N-glycans adduct onto peptides in the gas phase
year cv	2025	20242025	2025
venue crossref	Journal for the American Society of Mass Spectrometry	ChemRxivJournal of the American Society for Mass Spectrometry	Journal of the American Society for Mass Spectrometry	Journal of the American Society for Mass Spectrometry
kind cv	article	working_paperarticle	other
DOI cv	10.1021/jasms.4c00431	10.26434/chemrxiv-2024-568nn10.1021/jasms.4c00431
preprint DOI openalex		10.26434/chemrxiv-2024-568nn
first author openalex	Rangel-Angarita	Rangel-AngaritaRangel-Angarita	Rangel-Angarita

Citations

OpenAlex: 0
Scholar: 3
OpenAlex with related records: 1
DOI: 10.1021/jasms.4c00431
OpenAlex: W4407401071

Match decisions

doi merged · 1.00 · Run 18

2025 Recent Advances in Mass Spectrometry-Based Bottom-up Proteomics Analytical Chemistry article journal CV OA GS

CV span

lines 132–135 · CV · published

13258. Cameron Movassaghi, Jie Sun, Yuming Jiang, Amanda Momenzadeh, Natalie Turner, Vincent Chang, Nara Chung,133Ryan Chen, Elizabeth Browne, Chuwei Lin, Devin Schweppe, Stacy A. Malaker, and Jesse134Meyer. Recent Advances in Mass Spectrometry-Based Bottom-up Proteomics. Analytical135Chemistry. 2025, 97(9): 4728-4749 doi.org/10.1021/acs.analchem.4c06750

Institution fields

Peer reviewed: yes
First author: Movassaghi
Co-authors: Cameron Movassaghi; Jie Sun; Yuming Jiang; Amanda Momenzadeh; Natalie Turner; Vincent Chang; Nara Chung; Ryan Chen; Elizabeth Browne; Chuwei Lin; Devin Schweppe; Stacy A. Malaker; Jesse Meyer
Subfield: other
Method: review
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Recent Advances in Mass Spectrometry-Based Bottom-up Proteomics	Recent Advances in Mass Spectrometry-Based Bottom-Up Proteomics	Recent Advances in Mass Spectrometry-Based Bottom-Up Proteomics
year cv	2025	2025	2025
venue crossref	Analytical Chemistry	Analytical Chemistry	Analytical Chemistry
kind cv	article	article	other
DOI cv	10.1021/acs.analchem.4c06750	10.1021/acs.analchem.4c06750
first author openalex	Movassaghi	Movassaghi	Movassaghi

Citations

OpenAlex: 53
Scholar: 52
DOI: 10.1021/acs.analchem.4c06750
OpenAlex: W4407927404

Match decisions

doi merged · 1.00 · Run 18

2024 Analysis of mucin-domain glycoproteins using mass spectrometry Current Protocols article journal CV OA GS

CV span

lines 177–178 · CV · published

17749. Invited protocol: Keira E. Mahoney and Stacy A. Malaker*. Analysis of mucin-domain glycoproteins using mass178spectrometry. Current Protocols. 2024,4, e1100. doi.org/10.1002/cpz1.1100

Institution fields

Peer reviewed: yes
First author: Mahoney
Co-authors: Keira E. Mahoney; Stacy A. Malaker*
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Analysis of mucin-domain glycoproteins using mass spectrometry	Analysis of Mucin‐Domain Glycoproteins Using Mass Spectrometry	Analysis of Mucin‐Domain Glycoproteins Using Mass Spectrometry
year cv	2024	2024	2024
venue crossref	Current Protocols	Current Protocols	Current Protocols
kind cv	article	article	other
DOI cv	10.1002/cpz1.1100	10.1002/cpz1.1100
first author openalex	Mahoney	Mahoney	Mahoney

Citations

OpenAlex: 7
Scholar: 7
DOI: 10.1002/cpz1.1100
OpenAlex: W4400504699

Match decisions

doi merged · 1.00 · Run 18

2024 Expanding the repertoire of monosaccharides for cell-specific bioorthogonal tagging of glycoproteins RSC Chemical Biology article journal CV OA GS

CV span

lines 162–165 · CV · published

16252. Abdul Zafar, Sandhya Sridhar, Ganka Bineva-Todd, Anna Cioce, Nadia Abdulla, Vincent Chang, Stacy A. Malaker,163David S. Hewings, and Benjamin Schumann*. Expanding the repertoire of monosaccharides for cell-specific164bioorthogonal tagging of glycoproteins. RSC Chemical Biology. 2024, 5 (10), 1002-1009165doi.org/10.1039/D4CB00093E

Institution fields

Peer reviewed: yes
First author: Zafar
Co-authors: Abdul Zafar; Sandhya Sridhar; Ganka Bineva-Todd; Anna Cioce; Nadia Abdulla; Vincent Chang; Stacy A. Malaker; David S. Hewings; Benjamin Schumann*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Expanding the repertoire of monosaccharides for cell-specific bioorthogonal tagging of glycoproteins	Expanding the repertoire of GalNAc analogues for cell-specific bioorthogonal tagging of glycoproteinsExpanding the repertoire of GalNAc analogues for cell-specific bioorthogonal tagging of glycoproteins	Expanding the repertoire of GalNAc analogues for cell-specific bioorthogonal tagging of glycoproteins
year cv	2024	20242024	2024
venue crossref	RSC Chemical Biology	ChemRxivRSC Chemical Biology	RSC Chemical Biology
kind cv	article	working_paperarticle	other
DOI cv	10.1039/d4cb00093e	10.26434/chemrxiv-2024-tg4l310.1039/d4cb00093e
preprint DOI openalex		10.26434/chemrxiv-2024-tg4l3
first author openalex	Zafar	ZafarZafar	Zafar

Citations

OpenAlex: 8
Scholar: 7
DOI: 10.1039/d4cb00093e
OpenAlex: W4401748753

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1039/d4cb00093e for the RSC Chemical Biology publication.

2024 Glycoproteomics: charting new territory in mass spectrometry and glycobiology Journal of Mass Spectrometry article journal CV OA GS

CV span

lines 180–181 · CV · published

18048. Invited perspective: Stacy A. Malaker*. Glycoproteomics: charting new territory in mass spectrometry and181glycobiology. Journal of Mass Spectrometry. 2024, 59 (6), e5034. doi.org/10.1002/jms.5034

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: none
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Glycoproteomics: charting new territory in mass spectrometry and glycobiology	Glycoproteomics: Charting new territory in mass spectrometry and glycobiology	Glycoproteomics: Charting new territory in mass spectrometry and glycobiology
year cv	2024	2024	2024
venue crossref	Journal of Mass Spectrometry	Journal of Mass Spectrometry	Journal of Mass Spectrometry
kind cv	article	article	other
DOI cv	10.1002/jms.5034	10.1002/jms.5034
first author openalex	Malaker	Malaker	Malaker

Citations

OpenAlex: 12
Scholar: 20
DOI: 10.1002/jms.5034
OpenAlex: W4396804248

Match decisions

doi merged · 1.00 · Run 18

2024 Mass Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe the Mucinome Analytical Chemistry article journal CV OA GS

CV span

lines 189–191 · CV · published

18946. Keira E. Mahoney, Vincent Chang, Taryn M. Lucas, Krystyna Maruszko, and Stacy A. Malaker*. Mass190Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe191the Mucinome. Analytical Chemistry. 2024, 96(13):5242-5250. doi.org/10.1021/acs.analchem.3c05762

Institution fields

Peer reviewed: yes
First author: Mahoney
Co-authors: Keira E. Mahoney; Vincent Chang; Taryn M. Lucas; Krystyna Maruszko; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Mass Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe the Mucinome	Mass Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe the Mucinome	Mass Spectrometry-Compatible Elution Technique Enables an Improved Mucin-Selective Enrichment Strategy to Probe the Mucinome
year cv	2024	2024	2024
venue crossref	Analytical Chemistry	Analytical Chemistry	Analytical Chemistry
kind cv	article	article	other
DOI cv	10.1021/acs.analchem.3c05762	10.1021/acs.analchem.3c05762
first author openalex	Mahoney	Mahoney	Mahoney

Citations

OpenAlex: 15
Scholar: 20
DOI: 10.1021/acs.analchem.3c05762
OpenAlex: W4393036711

Match decisions

doi merged · 1.00 · Run 18

2024 O-glycoproteomics: methods, challenges, and new opportunities Glycoprotein Analysis chapter CV OA GS

CV span

lines 167–169 · CV · published

16751. Nicholas M. Rileyǂ* and Stacy A. Malakerǂ*. O-glycoproteomics: methods, challenges, and new opportunities.168In: Struwe, W. (ed) Glycoprotein Analysis. Royal Society of Chemistry Publishing, 2024. Cambridge, United169Kingdom. doi.org/10.1039/9781839166433-00118

Institution fields

Peer reviewed: yes
First author: Riley
Co-authors: Nicholas M. Rileyǂ*; Stacy A. Malakerǂ*
Subfield: other
Method: none
Invited: none
Publisher: Royal Society of Chemistry Publishing
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	O-glycoproteomics: methods, challenges, and new opportunities	O-Glycoproteomics: Methods, Challenges, and New Opportunities	O-Glycoproteomics: Methods, Challenges, and New Opportunities
year cv	2024	2024	2024
venue crossref	Glycoprotein Analysis
kind cv	chapter	chapter	other
DOI cv	10.1039/9781839166433-00118	10.1039/9781839166433-00118
first author openalex	Riley	Riley	Riley

Citations

OpenAlex: 2
Scholar: 2
DOI: 10.1039/9781839166433-00118
OpenAlex: W4403468573

Match decisions

doi merged · 1.00 · Run 18

2024 Quantification and site-specific analysis of co-occupied N- and O- glycopeptides Journal of Proteome Research article journal CV OA GS

CV span

lines 158–160 · CV · published

15853. Joann Chongsaritsinsuk, Valentina Rangel-Angarita, Taryn M. Lucas, Keira E. Mahoney, Olivia M. Enny, Mitchelle159Katemauswa, and Stacy A. Malaker*. Quantification and site-specific analysis of co-occupied N- and O-160glycopeptides. Journal of Proteome Research. 2024, 23(12), 5449-5461. doi/10.1021/acs.jproteome.4c00574

Institution fields

Peer reviewed: yes
First author: Chongsaritsinsuk
Co-authors: Joann Chongsaritsinsuk; Valentina Rangel-Angarita; Taryn M. Lucas; Keira E. Mahoney; Olivia M. Enny; Mitchelle Katemauswa; Stacy A. Malaker*
Subfield: other
Method: quantitative
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Quantification and site-specific analysis of co-occupied N- and O- glycopeptides	Quantification and site-specific analysis of co-occupied N- and O-glycopeptidesQuantification and Site-Specific Analysis of Co-occupied N- and O-Glycopeptides	Quantification and site-specific analysis of co-occupied N-and O-glycopeptides
year cv	2024	20242024	2024
venue crossref	Journal of Proteome Research	bioRxiv (Cold Spring Harbor Laboratory)Journal of Proteome Research	Journal of Proteome Research
kind cv	article	working_paperarticle	other
DOI cv	10.1021/acs.jproteome.4c00574	10.1101/2024.07.06.60234810.1021/acs.jproteome.4c00574
preprint DOI openalex		10.1101/2024.07.06.602348
first author openalex	Chongsaritsinsuk	ChongsaritsinsukChongsaritsinsuk	Chongsaritsinsuk

Citations

OpenAlex: 8
Scholar: 12
OpenAlex with related records: 11
DOI: 10.1021/acs.jproteome.4c00574
OpenAlex: W4404071427

Match decisions

doi merged · 1.00 · Run 18

2024 Stress-Induced Mucin 13 Reductions Drive Intestinal Microbiome Shifts and Despair Behaviors Brain, Behavior, and Immunity article journal CV OA GS

CV span

lines 183–187 · CV · published

18347. Courtney Rivet-Noor, Andrea R Merchak, Caroline Render, Naudia Gay, Rebecca M. Beiter, Ryan Brown, Austin184Keeler, G. Brett Moreau, Sihan Li, Deniz E. Olgun, Rachel Ofer, Alexandra D. Steigmeyer, Keira E. Mahoney, Tobey185Mihn Huu Phan, Kiranmayi Vemuri, Lei Chen, Jung-Bum Shin, Stacy A. Malaker, Chris Deppmann, Michael Verzi,186and Alban Gaultier. Stress-Induced Mucin 13 Reductions Drive Intestinal Microbiome Shifts and Despair Behaviors.187Brain, Behavior, and Immunity. 2024, S0889-1591(24)00309-X. doi: 10.1016/j.bbi.2024.03.028.

Institution fields

Peer reviewed: yes
First author: Rivet-Noor
Co-authors: Courtney Rivet-Noor; Andrea R Merchak; Caroline Render; Naudia Gay; Rebecca M. Beiter; Ryan Brown; Austin Keeler; G. Brett Moreau; Sihan Li; Deniz E. Olgun; Rachel Ofer; Alexandra D. Steigmeyer; Keira E. Mahoney; Tobey Mihn Huu Phan; Kiranmayi Vemuri; Lei Chen; Jung-Bum Shin; Stacy A. Malaker; Chris Deppmann; Michael Verzi; Alban Gaultier
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Stress-Induced Mucin 13 Reductions Drive Intestinal Microbiome Shifts and Despair Behaviors	Stress-Induced Mucin 13 Reductions Drive Intestinal Microbiome Shifts and Despair BehaviorsStress-induced mucin 13 reductions drive intestinal microbiome shifts and despair behaviors	Stress-induced mucin 13 reductions drive intestinal microbiome shifts and despair behaviors
year cv	2024	20222024	2024
venue crossref	Brain, Behavior, and Immunity	bioRxiv (Cold Spring Harbor Laboratory)Brain Behavior and Immunity	Brain, Behavior, and Immunity
kind cv	article	working_paperarticle	other
DOI cv	10.1016/j.bbi.2024.03.028	10.1101/2022.10.13.51213510.1016/j.bbi.2024.03.028
preprint DOI openalex		10.1101/2022.10.13.512135
first author openalex	Rivet-Noor	Rivet-NoorRivet-Noor	Rivet-Noor

Citations

OpenAlex: 9
Scholar: 12
DOI: 10.1016/j.bbi.2024.03.028
OpenAlex: W4393945534

Match decisions

doi merged · 1.00 · Run 18

2024 Unraveling O-Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry Analytical Chemistry article journal CV OA GS

CV span

lines 154–156 · CV · published

15454. Amanda Helms, Vincent Chang, Stacy A. Malaker, and Jennifer S. Brodbelt. Unraveling O-Glycan Diversity of155Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry. Analytical Chemistry.1562024, 96 (49), 19230-19237. doi/10.1021/acs.analchem.4c02011

Institution fields

Peer reviewed: yes
First author: Helms
Co-authors: Amanda Helms; Vincent Chang; Stacy A. Malaker; Jennifer S. Brodbelt
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Unraveling O-Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry	Unraveling O-Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass SpectrometryUnraveling O -Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry	Unraveling O-Glycan Diversity of Mucins: Insights from SmE Mucinase and Ultraviolet Photodissociation Mass Spectrometry
year cv	2024	20242024	2024
venue crossref	Analytical Chemistry	ChemRxivAnalytical Chemistry	Analytical Chemistry
kind cv	article	working_paperarticle	other
DOI cv	10.1021/acs.analchem.4c02011	10.26434/chemrxiv-2024-qzcd510.1021/acs.analchem.4c02011
preprint DOI openalex		10.26434/chemrxiv-2024-qzcd5
first author openalex	Helms	HelmsHelms	Helms

Citations

OpenAlex: 14
Scholar: 14
OpenAlex with related records: 16
DOI: 10.1021/acs.analchem.4c02011
OpenAlex: W4404635313

Match decisions

doi merged · 1.00 · Run 18

2023 Bump-and-hole engineering of human polypeptide N-acetylgalactosamine transferases to dissect their protein substrates and glycosylation sites in the living cell STAR Protocols article journal CV OA GS

CV span

lines 238–241 · CV · published

23837. Invited article for STAR Protocols: Beatriz Calle, Edgar Gonzalez-Rodriguez, Keira E. Mahoney, Anna Cioce, Chloe239Roustan, Helen Flynn, Stacy A. Malaker, and Benjamin Schumann. Bump-and-hole engineering of human240polypeptide N-acetylgalactosamine transferases to dissect their protein substrates and glycosylation sites in the241living cell. STAR Protocols. 2023, 4 (1): 101974.

Institution fields

Peer reviewed: yes
First author: Calle
Co-authors: Beatriz Calle; Edgar Gonzalez-Rodriguez; Keira E. Mahoney; Anna Cioce; Chloe Roustan; Helen Flynn; Stacy A. Malaker; Benjamin Schumann
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Bump-and-hole engineering of human polypeptide N-acetylgalactosamine transferases to dissect their protein substrates and glycosylation sites in the living cell	Bump-and-hole engineering of human polypeptide N-acetylgalactosamine transferases to dissect their protein substrates and glycosylation sites in cells	Bump-and-hole engineering of human polypeptide N-acetylgalactosamine transferases to dissect their protein substrates and glycosylation sites in cells
year cv	2023	2023	2023
venue crossref	STAR Protocols	STAR Protocols	STAR Protocols
kind cv	article	article	other
DOI crossref	10.1016/j.xpro.2022.101974	10.1016/j.xpro.2022.101974
first author openalex	Calle	de la Calle	Calle

Citations

OpenAlex: 3
Scholar: 8
DOI: 10.1016/j.xpro.2022.101974
OpenAlex: W4315498048

Match decisions

doi merged · 1.00 · Run 18

2023 Comprehensive analysis of glycoprotein Ibα ectodomain glycosylation Journal of Thrombosis and Haemostasis article journal CV OA GS

CV span

lines 233–236 · CV · published

23338. Marie A. Hollenhorst, Katherine H. Tiemeyer, Keira E. Mahoney, Kazuhiro Aoki, Mayumi Ishihara, Sarah C. Lowery,234Valentina Rangel-Angarita, Carolyn R. Bertozzi, and Stacy A. Malaker*. Comprehensive analysis of glycoprotein235Ibα ectodomain glycosylation. Journal of Thrombosis and Haemostasis, 2023, 21(4): 995-1009. doi.org/10.1101/2362022.07.19.500646

Institution fields

Peer reviewed: yes
First author: Hollenhorst
Co-authors: Marie A. Hollenhorst; Katherine H. Tiemeyer; Keira E. Mahoney; Kazuhiro Aoki; Mayumi Ishihara; Sarah C. Lowery; Valentina Rangel-Angarita; Carolyn R. Bertozzi; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Comprehensive analysis of glycoprotein Ibα ectodomain glycosylation	Comprehensive analysis of platelet glycoprotein Ibα glycosylationComprehensive analysis of platelet glycoprotein Ibα ectodomain glycosylation	Comprehensive analysis of platelet glycoprotein Ibα ectodomain glycosylation
year cv	2023	20222023	2023
venue crossref	Journal of Thrombosis and Haemostasis	bioRxiv (Cold Spring Harbor Laboratory)Journal of Thrombosis and Haemostasis	Journal of Thrombosis and Haemostasis
kind cv	article	working_paperarticle	other
DOI crossref	10.1016/j.jtha.2023.01.009	10.1101/2022.07.19.50064610.1016/j.jtha.2023.01.009
preprint DOI openalex		10.1101/2022.07.19.500646
first author openalex	Hollenhorst	HollenhorstHollenhorst	Hollenhorst

Citations

OpenAlex: 37
Scholar: 43
OpenAlex with related records: 39
DOI: 10.1016/j.jtha.2023.01.009
OpenAlex: W4316019749

Match decisions

doi merged · 1.00 · Run 18

2023 Design of a mucin-selective protease for targeted degradation of cancer-associated mucins Nature Biotechnology article journal CV OA GS

CV span

lines 210–216 · CV · published

21042. Kayvon Pedram, D. Judy Shon, Gabrielle S. Tender, Natalia R. Mantuano, Jason J. Northey, Kevin J. Metcalf, Simon211P. Wisnovsky, Nicholas M. Riley, Giovanni C. Forcina, Stacy A. Malaker, Angel Kuo, Benson M. George, Caitlyn L.212Miller, Kerriann M. Casey, José G. Vilches-Moure, Davey Huang, Valerie M. Weaver, Heinz Laübli, and Carolyn R.213Bertozzi. Design of a mucin-selective protease for targeted degradation of cancer-associated mucins. Nature214Biotechnology. 2023. doi.org/10.1038/s41587-023-01840-6215• Featured in Trends in Pharmacological Science “Spotlight Article”: Liza L. Greenburg, Deborah Fass.216Shearing of surface mucin saps tumor cell strength. doi.org/10.1016/j.tips.2023.08.011

Institution fields

Peer reviewed: yes
First author: Pedram
Co-authors: Kayvon Pedram; D. Judy Shon; Gabrielle S. Tender; Natalia R. Mantuano; Jason J. Northey; Kevin J. Metcalf; Simon P. Wisnovsky; Nicholas M. Riley; Giovanni C. Forcina; Stacy A. Malaker; Angel Kuo; Benson M. George; Caitlyn L. Miller; Kerriann M. Casey; José G. Vilches-Moure; Davey Huang; Valerie M. Weaver; Heinz Laübli; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Design of a mucin-selective protease for targeted degradation of cancer-associated mucins	Design of a mucin-selective protease for targeted degradation of cancer-associated mucinsDesign of a mucin-selective protease for targeted degradation of cancer-associated mucins	Design of a mucin-selective protease for targeted degradation of cancer-associated mucins
year cv	2023	20222023	2024
venue crossref	Nature Biotechnology	bioRxiv (Cold Spring Harbor Laboratory)Nature Biotechnology	Nature biotechnology
kind cv	article	working_paperarticle	other
DOI cv	10.1038/s41587-023-01840-6	10.1101/2022.05.20.49274810.1038/s41587-023-01840-6
preprint DOI openalex		10.1101/2022.05.20.492748
first author openalex	Pedram	PedramPedram	Pedram

Citations

OpenAlex: 93
Scholar: 94
OpenAlex with related records: 103
DOI: 10.1038/s41587-023-01840-6
OpenAlex: W4385555722

Match decisions

doi merged · 1.00 · Run 18

2023 False positive glycopeptide identification via in-FAIMS fragmentation JACS Au article journal CV OA GS

CV span

lines 201–203 · CV · published

20144. Valentina Rangel-Angarita, Keira E. Mahoney, Catherine Kwon, Raibat Sarker, Taryn M. Lucas, and Stacy A.202Malaker*. False positive glycopeptide identification via in-FAIMS fragmentation. JACS Au. 2023, 3(9): 2498–2509.203doi.org/10.1021/jacsau.3c00264

Institution fields

Peer reviewed: yes
First author: Rangel-Angarita
Co-authors: Valentina Rangel-Angarita; Keira E. Mahoney; Catherine Kwon; Raibat Sarker; Taryn M. Lucas; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	False positive glycopeptide identification via in-FAIMS fragmentation	False positive glycopeptide identification via in-FAIMS fragmentationFalse-Positive Glycopeptide Identification via In-FAIMS Fragmentation	False-Positive Glycopeptide Identification via In-FAIMS Fragmentation
year cv	2023	20232023	2023
venue crossref	JACS Au	bioRxiv (Cold Spring Harbor Laboratory)JACS Au	JACS Au
kind cv	article	working_paperarticle	other
DOI cv	10.1021/jacsau.3c00264	10.1101/2023.05.28.54264810.1021/jacsau.3c00264
preprint DOI openalex		10.1101/2023.05.28.542648
first author openalex	Rangel-Angarita	Rangel-AngaritaRangel-Angarita	Rangel-Angarita

Citations

OpenAlex: 18
Scholar: 21
OpenAlex with related records: 24
DOI: 10.1021/jacsau.3c00264
OpenAlex: W4386691880

Match decisions

doi merged · 1.00 · Run 18

2023 Glycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmE Nature Communications article journal CV OA GS

CV span

lines 193–199 · CV · published

19345. Joann Chongsaritsinsuk‡, Alexandra D. Steigmeyer‡, Keira E. Mahoney‡, Mia A. Rosenfeld‡, Taryn M. Lucas,194Courtney M. Smith, Alice Li, Deniz Ince, Fiona L. Kearns, Alexandria S. Battison, Marie A. Hollenhorst, D. Judy Shon,195Katherine H. Tiemeyer, Victor Attah, Catherine Kwon, Carolyn R. Bertozzi, Michael J. Ferracane, Mark A. Lemmon,196Rommie E. Amaro, and Stacy A. Malaker*. Glycoproteomic landscape and structural dynamics of TIM family197immune checkpoints enabled by mucinase SmE. Nature Communications. 2023, 14: 6169. doi.org/10.1038/s41467-198023-41756-y Human Proteome Organization (HUPO) Early Career Research Manuscript Competition –199First Place Award

Institution fields

Peer reviewed: yes
First author: Chongsaritsinsuk
Co-authors: Joann Chongsaritsinsuk‡; Alexandra D. Steigmeyer‡; Keira E. Mahoney‡; Mia A. Rosenfeld‡; Taryn M. Lucas; Courtney M. Smith; Alice Li; Deniz Ince; Fiona L. Kearns; Alexandria S. Battison; Marie A. Hollenhorst; D. Judy Shon; Katherine H. Tiemeyer; Victor Attah; Catherine Kwon; Carolyn R. Bertozzi; Michael J. Ferracane; Mark A. Lemmon; Rommie E. Amaro; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Glycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmE	Glycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmEGlycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmE	Glycoproteomic landscape and structural dynamics of TIM family immune checkpoints enabled by mucinase SmE
year cv	2023	20232023	2023
venue crossref	Nature Communications	bioRxiv (Cold Spring Harbor Laboratory)Nature Communications	Nature Communications
kind cv	article	working_paperarticle	other
DOI cv	10.1038/s41467-023-41756-y	10.1101/2023.02.01.52648810.1038/s41467-023-41756-y
preprint DOI openalex		10.1101/2023.02.01.526488
first author openalex	Chongsaritsinsuk	ChongsaritsinsukChongsaritsinsuk	Chongsaritsinsuk

Citations

OpenAlex: 54
Scholar: 63
OpenAlex with related records: 59
DOI: 10.1038/s41467-023-41756-y
OpenAlex: W4387335304

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1038/s41467-023-41756-y for the Nature Communications publication.

2023 Mutational screens highlight glycosylation as a modulator of colony-stimulating factor 3 receptor (CSF3R) activity Journal of Biological Chemistry article journal CV OA GS

CV span

lines 205–208 · CV · published

20543. Michael J. Hollander, Stacy A. Malaker, Nicholas M. Riley, Idalia Perez, Nayla M. Abney, Melissa A. Gray, Julia E.206Maxson, Jennifer R. Cochran, and Carolyn R. Bertozzi. Mutational screens highlight glycosylation as a modulator of207colony-stimulating factor 3 receptor (CSF3R) activity. Journal of Biological Chemistry. 2023, 299(6): 104755.208doi.org/10.1016/j.jbc.2023.104755

Institution fields

Peer reviewed: yes
First author: Hollander
Co-authors: Michael J. Hollander; Stacy A. Malaker; Nicholas M. Riley; Idalia Perez; Nayla M. Abney; Melissa A. Gray; Julia E. Maxson; Jennifer R. Cochran; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Mutational screens highlight glycosylation as a modulator of colony-stimulating factor 3 receptor (CSF3R) activity	Mutational screens highlight glycosylation as a modulator of CSF3R activityMutational screens highlight glycosylation as a modulator of colony-stimulating factor 3 receptor (CSF3R) activity	Mutational screens highlight glycosylation as a modulator of colony-stimulating factor 3 receptor (CSF3R) activity
year cv	2023	20222023	2023
venue crossref	Journal of Biological Chemistry	bioRxiv (Cold Spring Harbor Laboratory)Journal of Biological Chemistry	Journal of Biological Chemistry
kind cv	article	working_paperarticle	other
DOI cv	10.1016/j.jbc.2023.104755	10.1101/2022.08.01.50208810.1016/j.jbc.2023.104755
preprint DOI openalex		10.1101/2022.08.01.502088
first author openalex	Hollander	HollanderHollander	Hollander

Citations

OpenAlex: 6
Scholar: 11
DOI: 10.1016/j.jbc.2023.104755
OpenAlex: W4367043360

Match decisions

doi merged · 1.00 · Run 18

2023 O-Linked Sialoglycans Modulate the Proteolysis of SARS-CoV-2 Spike and Contribute to the Mutational Trajectory in Variants of Concern ACS Central Science article journal CV OA GS

CV span

lines 226–231 · CV · published

22639. Edgar Gonzalez-Rodriguez, Mia Zol-Hanlon, Ganka Bineva-Todd, Andrea Marchesi, Mark Skehel, Keira E. Mahoney,227Chloë Roustan, Annabel Borg, Lucia Di Vagno, Svend Kjaer, Antoni G. Wrobel, Donald J. Bentone, Philipp Nawrath,228Sabine L. Flitsch, Dhira Joshi, Andrés Manuel González-Ramírez, Katalin A. Wilkinson, Robert J. Wilkinson, Ramón229Hurtado-Guerrerom, Stacy A. Malaker, and Benjamin Schumann. O-Linked Sialoglycans Modulate the Proteolysis230of SARS-CoV-2 Spike and Contribute to the Mutational Trajectory in Variants of Concern. ACS Central Science. 2023,2319(3): 393-404.

Institution fields

Peer reviewed: yes
First author: Gonzalez-Rodriguez
Co-authors: Edgar Gonzalez-Rodriguez; Mia Zol-Hanlon; Ganka Bineva-Todd; Andrea Marchesi; Mark Skehel; Keira E. Mahoney; Chloë Roustan; Annabel Borg; Lucia Di Vagno; Svend Kjaer; Antoni G. Wrobel; Donald J. Bentone; Philipp Nawrath; Sabine L. Flitsch; Dhira Joshi; Andrés Manuel González-Ramírez; Katalin A. Wilkinson; Robert J. Wilkinson; Ramón Hurtado-Guerrerom; Stacy A. Malaker; Benjamin Schumann
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	O-Linked Sialoglycans Modulate the Proteolysis of SARS-CoV-2 Spike and Contribute to the Mutational Trajectory in Variants of Concern	O-Linked Sialoglycans Modulate the Proteolysis of SARS-CoV-2 Spike and Likely Contribute to the Mutational Trajectory in Variants of ConcernO-Linked Sialoglycans Modulate the Proteolysis of SARS-CoV-2 Spike and Likely Contribute to the Mutational Trajectory in Variants of Concern	O-Linked Sialoglycans Modulate the Proteolysis of SARS-CoV-2 Spike and Likely Contribute to the Mutational Trajectory in Variants of Concern
year cv	2023	20222023	2023
venue crossref	ACS Central Science	bioRxiv (Cold Spring Harbor Laboratory)ACS Central Science	ACS Central Science
kind cv	article	working_paperarticle	other
DOI crossref	10.1021/acscentsci.2c01349	10.1101/2022.09.15.50809310.1021/acscentsci.2c01349
preprint DOI openalex		10.1101/2022.09.15.508093
first author openalex	Gonzalez-Rodriguez	González-RodríguezGonzález-Rodríguez	Gonzalez-Rodriguez

Citations

OpenAlex: 28
Scholar: 34
OpenAlex with related records: 29
DOI: 10.1021/acscentsci.2c01349
OpenAlex: W4321076815

Match decisions

doi merged · 1.00 · Run 18

2023 The 2022 Nobel Prize in Chemistry – sweet! Glycobiology article journal CV OA GS

CV span

lines 223–224 · CV · published

22340. Michael Boyce, Stacy A. Malaker, Nicholas M. Riley, Jennifer Kohler. The 2022 Nobel Prize in Chemistry – sweet!224Glycobiology. 2023, 33(3): 178-181.

Institution fields

Peer reviewed: yes
First author: Boyce
Co-authors: Michael Boyce; Stacy A. Malaker; Nicholas M. Riley; Jennifer Kohler
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	The 2022 Nobel Prize in Chemistry – sweet!	The 2022 Nobel Prize in Chemistry—sweet!	The 2022 Nobel Prize in Chemistry—sweet!
year cv	2023	2023	2023
venue crossref	Glycobiology	Glycobiology	Glycobiology
kind cv	article	article	other
DOI crossref	10.1093/glycob/cwad016	10.1093/glycob/cwad016
first author openalex	Boyce	Boyce	Boyce

Citations

OpenAlex: 7
Scholar: 14
DOI: 10.1093/glycob/cwad016
OpenAlex: W4323652113

Match decisions

doi merged · 1.00 · Run 18

2023 Vibrio cholerae biofilms use modular adhesins with glycan- targeting and nonspecific surface binding domains for colonization Nature Communications article journal CV OA GS

CV span

lines 218–222 · CV · published

21841. Xin Huang, Thomas Nero, Ranjuna Weerasekera, Katherine Matej, Alex Hinbest, Zhaowei Jiang, Rebecca Lee,219Longjun Wu, Cecilia Chak, Hapinder Nijjer, Isabella Gibaldi, Hang Yang, Nathan Gamble, Wai-Leung Ng, Stacy A.220Malaker, Kaelyn Sumigray, Rich Olson, and Jing Yan. Vibrio cholerae biofilms use modular adhesins with glycan-221targeting and nonspecific surface binding domains for colonization. Nature Communications. 2023, 14(1): 2104.222

Institution fields

Peer reviewed: yes
First author: Huang
Co-authors: Xin Huang; Thomas Nero; Ranjuna Weerasekera; Katherine Matej; Alex Hinbest; Zhaowei Jiang; Rebecca Lee; Longjun Wu; Cecilia Chak; Hapinder Nijjer; Isabella Gibaldi; Hang Yang; Nathan Gamble; Wai-Leung Ng; Stacy A. Malaker; Kaelyn Sumigray; Rich Olson; Jing Yan
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Vibrio cholerae biofilms use modular adhesins with glycan- targeting and nonspecific surface binding domains for colonization	Vibrio cholerae biofilms use modular adhesins with glycan-targeting and nonspecific surface binding domains for colonization	Vibrio cholerae biofilms use modular adhesins with glycan-targeting and nonspecific surface binding domains for colonization
year cv	2023	2023	2023
venue crossref	Nature Communications	Nature Communications	Nature Communications
kind cv	article	article	other
DOI crossref	10.1038/s41467-023-37660-0	10.1038/s41467-023-37660-0
first author openalex	Huang	Huang	Huang

Citations

OpenAlex: 50
Scholar: 54
DOI: 10.1038/s41467-023-37660-0
OpenAlex: W4365451429

Match decisions

doi merged · 1.00 · Run 18

2023 Xylosyltransferase Bump-and-hole Engineering to Chemically Manipulate Proteoglycans in Mammalian Cells bioRxiv, 2023.12 article CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title scholar	Xylosyltransferase Bump-and-hole Engineering to Chemically Manipulate Proteoglycans in Mammalian Cells	Xylosyltransferase Bump-and-hole Engineering to Chemically Manipulate Proteoglycans in Mammalian Cells
year scholar	2023	2023
venue scholar	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind scholar	working_paper	other
DOI openalex	10.1101/2023.12.20.572522
preprint DOI	10.1101/2023.12.20.572522
first author scholar	Li	Li

Citations

OpenAlex: 5
Scholar: 3
DOI: 10.1101/2023.12.20.572522
OpenAlex: W4390023076

Match decisions

preprint merged · 1.00 · Run 18

2022 A metzincin-like O-glycopeptidase from Akkermansia muciniphila requires the Tn antigen for cleavage of the peptide bond Journal of Biological Chemistry article journal CV OA GS

CV span

lines 249–252 · CV · published

24935. Brendon J. Medley, Leif Leclaire, Nicole Thompson, Keira E. Mahoney, Benjamin Pluvinage, Matthew A. Parsons,250John E. Burke, Stacy A. Malaker, Warren Wakarchuk, and Alisdair B. Boraston. A metzincin-like O-glycopeptidase251from Akkermansia muciniphila requires the Tn antigen for cleavage of the peptide bond. Journal of Biological252Chemistry. 2022, 298 (10): 102439. doi.org/10.1016/j.jbc.2022.102439

Institution fields

Peer reviewed: yes
First author: Medley
Co-authors: Brendon J. Medley; Leif Leclaire; Nicole Thompson; Keira E. Mahoney; Benjamin Pluvinage; Matthew A. Parsons; John E. Burke; Stacy A. Malaker; Warren Wakarchuk; Alisdair B. Boraston
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	A metzincin-like O-glycopeptidase from Akkermansia muciniphila requires the Tn antigen for cleavage of the peptide bond	A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond	A previously uncharacterized O-glycopeptidase from Akkermansia muciniphila requires the Tn-antigen for cleavage of the peptide bond
year cv	2022	2022	2022
venue crossref	Journal of Biological Chemistry	Journal of Biological Chemistry	Journal of Biological Chemistry
kind cv	article	article	other
DOI cv	10.1016/j.jbc.2022.102439	10.1016/j.jbc.2022.102439
first author openalex	Medley	Medley	Medley

Citations

OpenAlex: 32
Scholar: 37
DOI: 10.1016/j.jbc.2022.102439
OpenAlex: W4293718623

Match decisions

doi merged · 1.00 · Run 18

2022 A systematic comparison of current bioinformatic tools for glycoproteomics data bioRxiv, 2022.03 article CV OA GS

CV span

lines 276–277 · CV · published

27630. Valentina Rangel-Angarita, Keira E. Mahoney, Deniz Ince, and Stacy A. Malaker*. A systematic comparison of277current bioinformatic tools for glycoproteomics data. 2022, bioRXiv: doi.org/10.1101/2022.03.15.484528

Institution fields

Peer reviewed: no
First author: Rangel-Angarita
Co-authors: Valentina Rangel-Angarita; Keira E. Mahoney; Deniz Ince; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title scholar	A systematic comparison of current bioinformatic tools for glycoproteomics data	A systematic comparison of current bioinformatic tools for glycoproteomics data	A systematic comparison of current bioinformatic tools for glycoproteomics data
year scholar	2022	2022	2022
venue scholar	bioRXiv	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind scholar	working_paper	working_paper	other
DOI cv	10.1101/2022.03.15.484528	10.1101/2022.03.15.484528
preprint DOI	10.1101/2022.03.15.484528	10.1101/2022.03.15.484528
first author scholar	Rangel-Angarita	Rangel-Angarita	Rangel-Angarita

Citations

OpenAlex: 14
Scholar: 14
DOI: 10.1101/2022.03.15.484528
OpenAlex: W4220763801

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1038/s43586-022-00128-4 for the Glycoproteomics review.

2022 Cell-specific Bioorthogonal Tagging of Glycoproteins Nature Communications article journal CV OA GS

CV span

lines 243–247 · CV · published

24336. Anna Cioce, Beatriz Calle, Tatiana Rizou, Sarah C. Lowery, Victoria Bridgeman, Keira E. Mahoney, Andrea Marchesi,244Ganka Bineva-Todd, Helen Flynn, Zhen Li, Omur Y. Tastan, Chloe Roustan, Thomas M. Wood, Tessa Keenan, Peter245Both, Kun Huang, Fabio Parmeggiani, Ambrosius P. Snijders, Mark Skehel, Svend Kjaer, Martin A. Fascione, Carolyn246R. Bertozzi, Sabine Flitsch, Stacy A. Malaker, Ilaria Malanchi, and Benjamin Schumann. Cell-specific Bioorthogonal247Tagging of Glycoproteins. Nature Communications. 2022, 13 (6237). doi.org/10.1038/s41467-022-33854-0

Institution fields

Peer reviewed: yes
First author: Cioce
Co-authors: Anna Cioce; Beatriz Calle; Tatiana Rizou; Sarah C. Lowery; Victoria Bridgeman; Keira E. Mahoney; Andrea Marchesi; Ganka Bineva-Todd; Helen Flynn; Zhen Li; Omur Y. Tastan; Chloe Roustan; Thomas M. Wood; Tessa Keenan; Peter Both; Kun Huang; Fabio Parmeggiani; Ambrosius P. Snijders; Mark Skehel; Svend Kjaer; Martin A. Fascione; Carolyn R. Bertozzi; Sabine Flitsch; Stacy A. Malaker; Ilaria Malanchi; Benjamin Schumann
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Cell-specific Bioorthogonal Tagging of Glycoproteins	Cell-specific Bioorthogonal Tagging of GlycoproteinsCell-specific bioorthogonal tagging of glycoproteins	Cell-specific bioorthogonal tagging of glycoproteins
year cv	2022	20212022	2022
venue crossref	Nature Communications	bioRxiv (Cold Spring Harbor Laboratory)Nature Communications	Nature Communications
kind cv	article	working_paperarticle	other
DOI cv	10.1038/s41467-022-33854-0	10.1101/2021.07.28.45413510.1038/s41467-022-33854-0
preprint DOI openalex		10.1101/2021.07.28.454135
first author openalex	Cioce	CioceCioce	Cioce

Citations

OpenAlex: 56
Scholar: 67
OpenAlex with related records: 59
DOI: 10.1038/s41467-022-33854-0
OpenAlex: W4307391362

Match decisions

doi merged · 1.00 · Run 18

2022 Compositions and methods for treating diseases and disorders associated with aberrant regulation of proteins US Patent App article CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	CV	OpenAlex	Scholar
title scholar			Compositions and methods for treating diseases and disorders associated with aberrant regulation of proteins
year scholar			2022
venue scholar			US Patent App.
kind scholar			other
first author scholar			Hunt

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

2022 Current strategies for characterization of mucin-domain glycoproteins Current Opinion in Chemical Biology review journal CV OA GS

CV span

lines 264–266 · CV · published

26432. Invited review for “Carbohydrate Biopolymers” Special Issue: Deniz Ince, Taryn M. Lucas, and Stacy A. Malaker*.265Current strategies for characterization of mucin-domain glycoproteins. Current Opinion in Chemical Biology. 2022,26669, 102174. Among Top 10 “Most Downloaded Articles” from Curr Op Chem Bio – September 2022

Institution fields

Peer reviewed: yes
First author: Ince
Co-authors: Deniz Ince; Taryn M. Lucas; Stacy A. Malaker*
Subfield: other
Method: review
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Current strategies for characterization of mucin-domain glycoproteins	Current strategies for characterization of mucin-domain glycoproteins	Current strategies for characterization of mucin-domain glycoproteins
year cv	2022	2022	2022
venue crossref	Current Opinion in Chemical Biology	Current Opinion in Chemical Biology	Current Opinion in Chemical Biology
kind cv	review	review	other
DOI crossref	10.1016/j.cbpa.2022.102174	10.1016/j.cbpa.2022.102174
first author openalex	Ince	Ince	Ince

Citations

OpenAlex: 55
Scholar: 63
DOI: 10.1016/j.cbpa.2022.102174
OpenAlex: W4283372586

Match decisions

doi merged · 1.00 · Run 18

2022 Glycoproteomics Nature Reviews Methods Primers article journal CV OA GS

CV span

lines 254–257 · CV · published

25434. Ieva Bagdonaiteǂ, Stacy A. Malakerǂ, Daniel A. Polaskyǂ, Nicholas M. Rileyǂ, Katrine Schjoldager, Sergey Y.255Vakhrushev, Adnan Halim, Kiyoko F. Aoki-Kinoshita, Alexey I Nesvizhskii, Carolyn R. Bertozzi, Hans Wandall,256Benjamin L. Parker, Morten Thaysen-Andersen, and Nichollas E. Scott. Glycoproteomics. Nature Reviews Methods257Primers. 2022, 2 (1): 1-29.

Institution fields

Peer reviewed: yes
First author: Bagdonaite
Co-authors: Ieva Bagdonaiteǂ; Stacy A. Malakerǂ; Daniel A. Polaskyǂ; Nicholas M. Rileyǂ; Katrine Schjoldager; Sergey Y. Vakhrushev; Adnan Halim; Kiyoko F. Aoki-Kinoshita; Alexey I Nesvizhskii; Carolyn R. Bertozzi; Hans Wandall; Benjamin L. Parker; Morten Thaysen-Andersen; Nichollas E. Scott
Subfield: other
Method: review
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Glycoproteomics	Glycoproteomics	Glycoproteomics
year cv	2022	2022	2022
venue crossref	Nature Reviews Methods Primers	Nature Reviews Methods Primers	Nature Reviews Methods Primers
kind cv	article	review	other
DOI crossref	10.1038/s43586-022-00128-4	10.1038/s43586-022-00128-4
first author openalex	Bagdonaite	Bagdonaite	Bagdonaite

Citations

OpenAlex: 267
Scholar: 312
DOI: 10.1038/s43586-022-00128-4
OpenAlex: W4283321869

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1038/s43586-022-00128-4 for the Glycoproteomics review.

2022 Interleukin-22 (IL-22) regulates B3GNT7 expression to induce fucosylation of glycoproteins in intestinal epithelial cells Journal of Biological Chemistry article journal CV OA GS

CV span

lines 279–282 · CV · published

27929. Daniela J. Carroll, Mary W. N. Burns, Lynda Mottram, Daniel C. Propheter, Andrew Boucher, Gabrielle M. Lessen,280Ashwani Kumar, Stacy A. Malaker, Chao Xing, Lora V. Hooper, Ulf Yrlid, Jennifer J. Kohler. Interleukin-22 (IL-22)281regulates B3GNT7 expression to induce fucosylation of glycoproteins in intestinal epithelial cells. Journal of Biological282Chemistry. 2022, 298 (2): 101463.

Institution fields

Peer reviewed: yes
First author: Carroll
Co-authors: Daniela J. Carroll; Mary W. N. Burns; Lynda Mottram; Daniel C. Propheter; Andrew Boucher; Gabrielle M. Lessen; Ashwani Kumar; Stacy A. Malaker; Chao Xing; Lora V. Hooper; Ulf Yrlid; Jennifer J. Kohler
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Interleukin-22 (IL-22) regulates B3GNT7 expression to induce fucosylation of glycoproteins in intestinal epithelial cells	Interleukin-22 regulates B3GNT7 expression to induce fucosylation of glycoproteins in intestinal epithelial cells	Interleukin-22 regulates B3GNT7 expression to induce fucosylation of glycoproteins in intestinal epithelial cells
year cv	2022	2021	2022
venue crossref	Journal of Biological Chemistry	Journal of Biological Chemistry	Journal of Biological Chemistry
kind cv	article	article	other
DOI crossref	10.1016/j.jbc.2021.101463	10.1016/j.jbc.2021.101463
first author openalex	Carroll	Carroll	Carroll

Citations

OpenAlex: 23
Scholar: 29
DOI: 10.1016/j.jbc.2021.101463
OpenAlex: W4200402349

Match decisions

doi merged · 1.00 · Run 18

2022 Methods Employing Mucin-Specific Proteases US Patent App article CV OA GS needs review

CV span

lines 465–466 · CV · unverified · published

4657. Methods Employing Mucin-Specific Proteases. Carolyn R. Bertozzi, Stacy A. Malaker, Kayvon Pedram, and D. Judy466Shon. US Provisional Patent Number 17/291,376. Licensed by Sigma Aldrich: P/N SAE0202

Institution fields

Peer reviewed: none
First author: Bertozzi
Co-authors: Carolyn R. Bertozzi; Stacy A. Malaker; Kayvon Pedram; D. Judy Shon
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar
title scholar	Methods Employing Mucin-Specific Proteases	Methods Employing Mucin-Specific Proteases
year scholar		2022
venue scholar		US Patent App.
kind scholar	other	other
first author cv	Bertozzi	Bertozzi

Citations

OpenAlex: none
Scholar: none

Match decisions

fingerprint merged · 1.00 · Run 18

2022 Mucus sialylation determines intestinal host-commensal homeostasis Cell article journal CV OA GS

CV span

lines 268–274 · CV · published

26831. Yikun Yao, Girak Kim, Samantha Shafer, Zuojia Chen, Satoshi Kubo, Yanlong Ji, Jialie Luo, Weiming Yang, Sebastian269Perner, Chrysi Kanellopoulou, Ann Park, Ping Jiang, Safa Baris, Elif Karakoc Aydiner, Deniz Ertem, Daniel J. Mulde,270Neil Warner, Anne M. Griffiths, Chani Topf-Olivestone, Michal Kori, Lael Werner, Jodie Ouahed, Michael Field,271Chengyu Liu, Benjamin Schwarz, Sundar Ganesan, Jian Song, Henning Urlaub, Thomas Oellerich, Stacy A.272Malaker, Lixin Zheng, Carolyn R. Bertozzi, Yu Zhang, Helen Matthews, Will Montgomery, Han-Yu Shih, Jiansheng273iang, Scott Snapper, Aleixo M. Muise, Dror Shouval, Ahmet Ozen , Kuan-Ting Pan, Chuan Wu, and Michael J.274Lenardo. Mucus sialylation determines intestinal host-commensal homeostasis. Cell. 2022, 185 (7): 1172-1188.e28.

Institution fields

Peer reviewed: yes
First author: Yao
Co-authors: Yikun Yao; Girak Kim; Samantha Shafer; Zuojia Chen; Satoshi Kubo; Yanlong Ji; Jialie Luo; Weiming Yang; Sebastian Perner; Chrysi Kanellopoulou; Ann Park; Ping Jiang; Safa Baris; Elif Karakoc Aydiner; Deniz Ertem; Daniel J. Mulde; Neil Warner; Anne M. Griffiths; Chani Topf-Olivestone; Michal Kori; Lael Werner; Jodie Ouahed; Michael Field; Chengyu Liu; Benjamin Schwarz; Sundar Ganesan; Jian Song; Henning Urlaub; Thomas Oellerich; Stacy A. Malaker; Lixin Zheng; Carolyn R. Bertozzi; Yu Zhang; Helen Matthews; Will Montgomery; Han-Yu Shih; Jiansheng iang; Scott Snapper; Aleixo M. Muise; Dror Shouval; Ahmet Ozen; Kuan-Ting Pan; Chuan Wu; Michael J. Lenardo
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Mucus sialylation determines intestinal host-commensal homeostasis	Mucus sialylation determines intestinal host-commensal homeostasis	Mucus sialylation determines intestinal host-commensal homeostasis
year cv	2022	2022	2022
venue crossref	Cell	Cell	Cell
kind cv	article	article	other
DOI crossref	10.1016/j.cell.2022.02.013	10.1016/j.cell.2022.02.013
first author openalex	Yao	Yao	Yao

Citations

OpenAlex: 246
Scholar: 296
DOI: 10.1016/j.cell.2022.02.013
OpenAlex: W4221114949

Match decisions

doi merged · 1.00 · Run 18

2022 On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape Cell Chemical Biology article journal CV OA GS

CV span

lines 297–300 · CV · published

29725. Stacy A. Malakerǂ, Jusal Quanicoǂ, Antonella Raffo Romero, Firas Kobeissy, Soulaimane Aboulouard, Dominique298Tierny, Carolyn R. Bertozzi, Isabelle Fournier, and Michel Salzet. On-tissue spatially resolved glycoproteomics guided299by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape. Cell Chemical Biology.3002022, 29 (1): 30-42 e4.

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malakerǂ; Jusal Quanicoǂ; Antonella Raffo Romero; Firas Kobeissy; Soulaimane Aboulouard; Dominique Tierny; Carolyn R. Bertozzi; Isabelle Fournier; Michel Salzet
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape	On-tissue spatially-resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscapeOn-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape	On-tissue spatially resolved glycoproteomics guided by N-glycan imaging reveal global dysregulation of canine glioma glycoproteomic landscape
year cv	2022	20202021	2022
venue crossref	Cell Chemical Biology	bioRxiv (Cold Spring Harbor Laboratory)Cell chemical biology	Cell Chemical Biology
kind cv	article	working_paperarticle	other
DOI crossref	10.1016/j.chembiol.2021.05.007	10.1101/2020.10.02.32443410.1016/j.chembiol.2021.05.007
preprint DOI openalex		10.1101/2020.10.02.324434
first author openalex	Malaker	MalakerMalaker	Malaker

Also recorded as

W3189048307 (DOI 10.2139/ssrn.3723765) · preprint · 2020 On-Tissue Spatially-Resolved Glycoproteomics Guided by N-Glycan Imaging Reveal Global Dysregulation of Canine Glioma Glycoproteomic Landscape

Citations

OpenAlex: 36
Scholar: 38
OpenAlex with related records: 40
DOI: 10.1016/j.chembiol.2021.05.007
OpenAlex: W3171692492

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1038/s43586-022-00128-4 for the Glycoproteomics review.

2022 Revealing the human mucinome Nature Communications article CV OA GS

CV span

lines 259–262 · CV · published

25933. Stacy A. Malaker*ǂ, Nicholas M. Rileyǂ, D. Judy Shon, Kayvon Pedram, Venkatesh Krishnan, Oliver Dorigo, and260Carolyn R. Bertozzi*. Revealing the human mucinome. Nature Communications. 2022, 13 (1): 1-13.261• Featured in Trends in Microbiology “Spotlight Article”: Abigail E. Reeves, Mia L. Huang. Mucopedia 101:262Capturing and assigning mucin-domain glycoproteins. doi.org/10.1016/j.tim.2022.09.004

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malaker*ǂ; Nicholas M. Rileyǂ; D. Judy Shon; Kayvon Pedram; Venkatesh Krishnan; Oliver Dorigo; Carolyn R. Bertozzi*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Revealing the human mucinome	Revealing the human mucinomeRevealing the human mucinome	Revealing the human mucinome
year cv	2022	20212022	2022
venue cv	Nature Communications	bioRxiv (Cold Spring Harbor Laboratory)Nature Communications	Nature Communications
kind cv	article	working_paperarticle	other
DOI cv	10.1016/j.tim.2022.09.004	10.1101/2021.01.27.42851010.1038/s41467-022-31062-4
preprint DOI openalex		10.1101/2021.01.27.428510
first author cv	Malaker	MalakerMalaker	Malaker

Also recorded as

W4283162421 (DOI 10.1038/s41467-022-31062-4) · same title · 2022

Citations

OpenAlex: 12
Scholar: 125
DOI: 10.1016/j.tim.2022.09.004
OpenAlex: W3121455987

Match decisions

classified merged · 1.00 · Run 18 resolved by the OpenAlex classification: same_title

2021 Benefits of chemical sugar modifications introduced by click chemistry for glycoproteomic analyses Journal of the American Society for Mass Spectrometry article journal CV OA GS

CV span

lines 314–318 · CV · published

31422. Invited article for “Emerging Talent” Special Issue: Beatriz Calle‡, Ganka Bineva-Todd‡, Andrea Marchesi‡, Helen315Flynn, Mattia Ghirardello, Omur Y. Tastan, Chloe Roustan, Junwon Choi, M. Carmen Galan, Benjamin Schumann*,316and Stacy A. Malaker*. Benefits of chemical sugar modifications introduced by click chemistry for glycoproteomic317analyses. Journal of the American Society for Mass Spectrometry. 2021, 32(9): 3266-2375. Human Proteome318Organization (HUPO) Early Career Research Manuscript Competition – Finalist

Institution fields

Peer reviewed: yes
First author: Calle
Co-authors: Beatriz Calle‡; Ganka Bineva-Todd‡; Andrea Marchesi‡; Helen Flynn; Mattia Ghirardello; Omur Y. Tastan; Chloe Roustan; Junwon Choi; M. Carmen Galan; Benjamin Schumann*; Stacy A. Malaker*
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Benefits of chemical sugar modifications introduced by click chemistry for glycoproteomic analyses	Benefits of Chemical Sugar Modifications Introduced by Click Chemistry for Glycoproteomic Analyses	Benefits of chemical sugar modifications introduced by click chemistry for glycoproteomic analyses
year cv	2021	2021	2021
venue crossref	Journal of the American Society for Mass Spectrometry	Journal of the American Society for Mass Spectrometry	Journal of the American Society for Mass Spectrometry
kind cv	article	article	other
DOI crossref	10.1021/jasms.1c00084	10.1021/jasms.1c00084
first author openalex	Calle	de la Calle	Calle

Citations

OpenAlex: 35
Scholar: 40
DOI: 10.1021/jasms.1c00084
OpenAlex: W3153776680

Match decisions

doi merged · 1.00 · Run 18

2021 Classification, structural biology, and applications of mucin domain-targeting proteases Biochemical Journal review journal CV OA GS

CV span

lines 310–312 · CV · published

31023. Invited review article: D. Judy Shon, Angel Kuo, Michael J. Ferracane, and Stacy A.311Malaker*. Classification, structural biology, and applications of mucin domain-targeting312proteases. Biochemical Journal, 2021, 478(8): 1585-1603.

Institution fields

Peer reviewed: yes
First author: Shon
Co-authors: D. Judy Shon; Angel Kuo; Michael J. Ferracane; Stacy A. Malaker*
Subfield: other
Method: review
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Classification, structural biology, and applications of mucin domain-targeting proteases	Classification, structural biology, and applications of mucin domain-targeting proteases	Classification, structural biology, and applications of mucin domain-targeting proteases
year cv	2021	2021	2021
venue crossref	Biochemical Journal	Biochemical Journal	Biochemical Journal
kind cv	review	article	other
DOI crossref	10.1042/bcj20200607	10.1042/bcj20200607
first author openalex	Shon	Shon	Shon

Citations

OpenAlex: 82
Scholar: 85
DOI: 10.1042/bcj20200607
OpenAlex: W3158046103

Match decisions

doi merged · 1.00 · Run 18

2021 Generating Orthogonal Glycosyltransferase-Nucleotide Sugar Pairs as Next Generation Glycobiology Tools Current Opinion in Chemical Biology review journal CV OA GS

CV span

lines 324–326 · CV · published

32420. Invited review article: Anna Coice, Stacy A. Malaker*, and Benjamin Schumann*. Generating Orthogonal325Glycosyltransferase-Nucleotide Sugar Pairs as Next Generation Glycobiology Tools. Current Opinion in Chemical326Biology. 2021, 60: 66-78.

Institution fields

Peer reviewed: yes
First author: Coice
Co-authors: Anna Coice; Stacy A. Malaker*; Benjamin Schumann*
Subfield: other
Method: review
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Generating Orthogonal Glycosyltransferase-Nucleotide Sugar Pairs as Next Generation Glycobiology Tools	Generating orthogonal glycosyltransferase and nucleotide sugar pairs as next-generation glycobiology tools	Generating orthogonal glycosyltransferase and nucleotide sugar pairs as next-generation glycobiology tools
year cv	2021	2020	2021
venue crossref	Current Opinion in Chemical Biology	Current Opinion in Chemical Biology	Current Opinion in Chemical Biology
kind cv	review	review	other
DOI crossref	10.1016/j.cbpa.2020.09.001	10.1016/j.cbpa.2020.09.001
first author openalex	Coice	Cioce	Cioce

Citations

OpenAlex: 47
Scholar: 54
DOI: 10.1016/j.cbpa.2020.09.001
OpenAlex: W3095552869

Match decisions

doi merged · 1.00 · Run 18

2021 Genome-wide CRISPR screens reveal a specific ligand for glycan-binding immune checkpoint receptor Siglec-7 Proceedings of the National Academy of Sciences article journal CV OA GS

CV span

lines 328–331 · CV · published

32819. Simon P. Wisnovsky, Leonhard Mockl, Stacy A. Malaker, Kayvon Pedram, Gaelen Hess, Nicholas M. Riley, Melissa329A. Gray, Benhamin A.H. Smith, Michael C. Bassik, W.E. Moerner, and Carolyn R. Bertozzi. Genome-wide CRISPR330screens reveal a specific ligand for glycan-binding immune checkpoint receptor Siglec-7. Proceedings of the National331Academy of Sciences USA. 2021, 118(5): e2015024118.

Institution fields

Peer reviewed: yes
First author: Wisnovsky
Co-authors: Simon P. Wisnovsky; Leonhard Mockl; Stacy A. Malaker; Kayvon Pedram; Gaelen Hess; Nicholas M. Riley; Melissa A. Gray; Benhamin A.H. Smith; Michael C. Bassik; W.E. Moerner; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Genome-wide CRISPR screens reveal a specific ligand for glycan-binding immune checkpoint receptor Siglec-7	Genome-wide CRISPR screens reveal a specific ligand for the glycan-binding immune checkpoint receptor Siglec-7	Genome-wide CRISPR screens reveal a specific ligand for the glycan-binding immune checkpoint receptor Siglec-7
year cv	2021	2021	2021
venue crossref	Proceedings of the National Academy of Sciences USA	Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences
kind cv	article	article	other
DOI crossref	10.1073/pnas.2015024118	10.1073/pnas.2015024118
first author openalex	Wisnovsky	Wisnovsky	Wisnovsky

Citations

OpenAlex: 156
Scholar: 175
DOI: 10.1073/pnas.2015024118
OpenAlex: W3125874893

Match decisions

doi merged · 1.00 · Run 18

2021 Mucinomics as the next frontier of mass spectrometry ACS Chemical Biology review journal CV OA GS

CV span

lines 294–295 · CV · published

29426. Invited review for “Chemical Glycobiology” Special Issue: Valentina Rangel-Angarita and Stacy A. Malaker*.295Mucinomics as the next frontier of mass spectrometry. ACS Chemical Biology. 2021, 16(10): 1866-1883.

Institution fields

Peer reviewed: yes
First author: Rangel-Angarita
Co-authors: Valentina Rangel-Angarita; Stacy A. Malaker*
Subfield: other
Method: review
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Mucinomics as the next frontier of mass spectrometry	Mucinomics as the Next Frontier of Mass Spectrometry	Mucinomics as the Next Frontier of Mass Spectrometry
year cv	2021	2021	2021
venue crossref	ACS Chemical Biology	ACS Chemical Biology	ACS Chemical Biology
kind cv	review	article	other
DOI crossref	10.1021/acschembio.1c00384	10.1021/acschembio.1c00384
first author openalex	Rangel-Angarita	Rangel-Angarita	Rangel-Angarita

Citations

OpenAlex: 52
Scholar: 55
DOI: 10.1021/acschembio.1c00384
OpenAlex: W3183463524

Match decisions

doi merged · 1.00 · Run 18

2021 Novel antibodies for the simple and efficient enrichment of native O-GlcNAc modified peptides Molecular & Cellular Proteomics article journal CV OA GS

CV span

lines 284–286 · CV · published

28428. Rajan Burt, Kimberly Lee, Borislav Dejanovic, Xiang Li, Johain Ounadjela, Anjana Rao, Stacy A. Malaker, Steven285A. Carr, and Samuel A. Myers. Novel antibodies for the simple and efficient enrichment of native O-GlcNAc modified286peptides. Molecular and Cellular Proteomics. 2021, 20 100167.

Institution fields

Peer reviewed: yes
First author: Burt
Co-authors: Rajan Burt; Kimberly Lee; Borislav Dejanovic; Xiang Li; Johain Ounadjela; Anjana Rao; Stacy A. Malaker; Steven A. Carr; Samuel A. Myers
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Novel antibodies for the simple and efficient enrichment of native O-GlcNAc modified peptides	Novel antibodies for the simple and efficient enrichment of native O-GlcNAc modified peptidesNovel Antibodies for the Simple and Efficient Enrichment of Native O-GlcNAc Modified Peptides	Novel antibodies for the simple and efficient enrichment of native O-GlcNAc modified peptides
year cv	2021	20212021	2021
venue crossref	Molecular and Cellular Proteomics	bioRxiv (Cold Spring Harbor Laboratory)Molecular & Cellular Proteomics	Molecular & Cellular Proteomics	Molecular & Cellular Proteomics
kind cv	article	working_paperarticle	other
DOI crossref	10.1016/j.mcpro.2021.100167	10.1101/2021.05.28.44622810.1016/j.mcpro.2021.100167
preprint DOI openalex		10.1101/2021.05.28.446228
first author openalex	Burt	BurtBurt	Burt

Citations

OpenAlex: 56
Scholar: 61
OpenAlex with related records: 57
DOI: 10.1016/j.mcpro.2021.100167
OpenAlex: W3205740387

Match decisions

doi merged · 1.00 · Run 18

2021 Small RNAs are modified with N-glycans and are primarily displayed on the surface of living cells Cell article journal CV OA GS

CV span

lines 302–308 · CV · published

30224. Ryan A. Flynn, Kayvon Pedram, Stacy A. Malaker, Pedro J. Batista, Benjamin A.H. Smith,303Alex G. Johnson, Benson M. George, Karim Majzoub, Peter W. Villalta, Jan E. Carette, and304Carolyn R. Bertozzi. Small RNAs are modified with N-glycans and are primarily displayed on305the surface of living cells. Cell. 2021, 184(10): 3109-3124.e22.306doi.org/10.1016/j.cell.2021.04.023 Featured in C&E News, HHMI News, The307Scientist, Boston Children’s Hospital Innovation News, and Stanford News.308Featured on journal cover (see right)

Institution fields

Peer reviewed: yes
First author: Flynn
Co-authors: Ryan A. Flynn; Kayvon Pedram; Stacy A. Malaker; Pedro J. Batista; Benjamin A.H. Smith; Alex G. Johnson; Benson M. George; Karim Majzoub; Peter W. Villalta; Jan E. Carette; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Small RNAs are modified with N-glycans and are primarily displayed on the surface of living cells	Small RNAs are modified with N-glycans and displayed on the surface of living cells	Small RNAs are modified with N-glycans and displayed on the surface of living cells
year cv	2021	2021	2021
venue crossref	Cell	Cell	Cell
kind cv	article	article	other
DOI cv	10.1016/j.cell.2021.04.023	10.1016/j.cell.2021.04.023
first author openalex	Flynn	Flynn	Flynn

Citations

OpenAlex: 648
Scholar: 761
DOI: 10.1016/j.cell.2021.04.023
OpenAlex: W3162916603

Match decisions

doi merged · 1.00 · Run 18

2021 Tumor infiltrating lymphocytes target HLA-I phosphopeptides derived from cancer signaling in colorectal cancer Frontiers in Immunology article journal CV OA GS

CV span

lines 288–292 · CV · published

28827. Sarah A. Penny, Jennifer G. Abelin, Stacy A. Malaker, Paisley T. Myers, Abu Z. Saeed, Lora G. Steadman, Dina L.289Bai, Stephen T. Ward, Jeffrey Shabanowitz, Donald F. Hunt, and Mark Cobbold. Tumor infiltrating lymphocytes290291target HLA-I phosphopeptides derived from cancer signaling in colorectal cancer. Frontiers Immunology. 2021,29212:723566.

Institution fields

Peer reviewed: yes
First author: Penny
Co-authors: Sarah A. Penny; Jennifer G. Abelin; Stacy A. Malaker; Paisley T. Myers; Abu Z. Saeed; Lora G. Steadman; Dina L. Bai; Stephen T. Ward; Jeffrey Shabanowitz; Donald F. Hunt; Mark Cobbold
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Tumor infiltrating lymphocytes target HLA-I phosphopeptides derived from cancer signaling in colorectal cancer	Tumor Infiltrating Lymphocytes Target HLA-I Phosphopeptides Derived From Cancer Signaling in Colorectal Cancer	Tumor infiltrating lymphocytes target HLA-I phosphopeptides derived from cancer signaling in colorectal cancer
year cv	2021	2021	2021
venue crossref	Frontiers Immunology	Frontiers in Immunology	Frontiers in Immunology	Frontiers in Immunology
kind cv	article	article	other
DOI crossref	10.3389/fimmu.2021.723566	10.3389/fimmu.2021.723566
first author openalex	Penny	Penny	Penny

Citations

OpenAlex: 23
Scholar: 20
DOI: 10.3389/fimmu.2021.723566
OpenAlex: W3194883666

Match decisions

doi merged · 1.00 · Run 18

2021 VectorMOD: method for bottom-up proteomic characterization of rAAV capsid PTMs and vector impurities Frontiers in Immunology article journal CV OA GS

CV span

lines 320–322 · CV · published

32021. Invited article: Neil G. Rumachik, Stacy A. Malaker*, and Nicole K. Paulk*. VectorMOD: method for bottom-up321proteomic characterization of rAAV capsid PTMs and vector impurities. Frontiers Immunology. 2021, 12: 657795.322doi: 10.3389/fimmu.2021.657795.

Institution fields

Peer reviewed: yes
First author: Rumachik
Co-authors: Neil G. Rumachik; Stacy A. Malaker*; Nicole K. Paulk*
Subfield: other
Method: none
Invited: yes
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	VectorMOD: method for bottom-up proteomic characterization of rAAV capsid PTMs and vector impurities	VectorMOD: Method for Bottom-Up Proteomic Characterization of rAAV Capsid Post-Translational Modifications and Vector Impurities	VectorMOD: Method for bottom-up proteomic characterization of rAAV capsid post-translational modifications and vector impurities
year cv	2021	2021	2021
venue crossref	Frontiers Immunology	Frontiers in Immunology	Frontiers in Immunology	Frontiers in Immunology
kind cv	article	article	other
DOI cv	10.3389/fimmu.2021.657795	10.3389/fimmu.2021.657795
first author openalex	Rumachik	Rumachik	Rumachik

Citations

OpenAlex: 17
Scholar: 24
DOI: 10.3389/fimmu.2021.657795
OpenAlex: W3149364127

Match decisions

doi merged · 1.00 · Run 18

2020 An Enzymatic Toolkit for Selective Proteolysis, Detection, and Visualization of Mucin-Domain Glycoproteins Proceedings of the National Academy of Sciences version 2020 An enzymatic toolkit for selective proteolysis, detection, and visualization of mucin-dom… article journal CV OA GS

CV span

lines 357–359 · CV · published

35714. D. Judy Shon, Stacy A. Malaker, Kayvon Pedram, Emily Yang, Venkatesh Krishnan, Oliver Dorigo, and Carolyn R.358Bertozzi. An Enzymatic Toolkit for Selective Proteolysis, Detection, and Visualization of Mucin-Domain Glycoproteins.359Proceedings of the National Academy of Sciences USA. 2020; 117(35): 21299-21307.

Institution fields

Peer reviewed: yes
First author: Shon
Co-authors: D. Judy Shon; Stacy A. Malaker; Kayvon Pedram; Emily Yang; Venkatesh Krishnan; Oliver Dorigo; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	An Enzymatic Toolkit for Selective Proteolysis, Detection, and Visualization of Mucin-Domain Glycoproteins	An enzymatic toolkit for selective proteolysis, detection, and visualization of mucin-domain glycoproteinsAn Enzymatic Toolkit for Selective Proteolysis, Detection, and Visualization of Mucin-Domain Glycoproteins	An enzymatic toolkit for selective proteolysis, detection, and visualization of mucin-domain glycoproteins
year cv	2020	20202020	2020
venue crossref	Proceedings of the National Academy of Sciences USA	Proceedings of the National Academy of SciencesChemRxiv	Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences
kind cv	article	articleworking_paper	other
DOI crossref	10.1073/pnas.2012196117	10.1073/pnas.201219611710.26434/chemrxiv.12476369.v1
preprint DOI openalex		10.26434/chemrxiv.12476369.v1
first author openalex	Shon	ShonShon	Shon

Citations

OpenAlex: 132
Scholar: 147
OpenAlex with related records: 141
DOI: 10.1073/pnas.2012196117
OpenAlex: W3049699113

Match decisions

doi merged · 1.00 · Run 18

2020 Article Watch: December, 2020 Nature article journal CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	CV	OpenAlex	Scholar
title scholar			Article Watch: December, 2020
year scholar			2020
venue scholar			Nature
kind scholar			other
first author scholar			Riley

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

2020 Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells Molecular Cell article journal CV OA GS

CV span

lines 366–371 · CV · published

36612. Benjamin Schumann, Stacy A. Malaker, Simon P. Wisnovsky, Marjoke F. Debets,367Anthony J. Agbay, Daniel Fernandez, Lauren J. S. Wagner, Liang Lin, Zhen Li, Junwon368Choi, Douglas M. Fox, Jessie M. Peh, Melissa A. Gray, Kayvon Pedram, Jennifer J. Kohler,369Milan Mrksich, and Carolyn R. Bertozzi. Bump-and-Hole Engineering Identifies Specific370Substrates of Glycosyltransferases in Living Cells. Molecular Cell, 2020; 78(5): 834-834371Featured on the journal cover (see right)

Institution fields

Peer reviewed: yes
First author: Schumann
Co-authors: Benjamin Schumann; Stacy A. Malaker; Simon P. Wisnovsky; Marjoke F. Debets; Anthony J. Agbay; Daniel Fernandez; Lauren J. S. Wagner; Liang Lin; Zhen Li; Junwon Choi; Douglas M. Fox; Jessie M. Peh; Melissa A. Gray; Kayvon Pedram; Jennifer J. Kohler; Milan Mrksich; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells	Bump-and-Hole Engineering Identifies Specific Substrates of Glycosyltransferases in Living Cells	Bump-and-hole engineering identifies specific substrates of glycosyltransferases in living cells
year cv	2020	2020	2020
venue crossref	Molecular Cell	Molecular Cell	Molecular cell
kind cv	article	article	other
DOI crossref	10.1016/j.molcel.2020.03.030	10.1016/j.molcel.2020.03.030
first author openalex	Schumann	Schumann	Schumann

Citations

OpenAlex: 131
Scholar: 138
DOI: 10.1016/j.molcel.2020.03.030
OpenAlex: W3020437909

Match decisions

doi merged · 1.00 · Run 18

2020 Electron-based dissociation is needed for O-glycopeptides derived from OpeRATOR proteolysis Analytical Chemistry article journal CV OA GS

CV span

lines 340–341 · CV · published

34017. Nicholas M. Riley, Stacy A. Malaker, and Carolyn R. Bertozzi. Electron-based dissociation is needed for O-341glycopeptides derived from OpeRATOR proteolysis. Analytical Chemistry. 2020, 92(22): 14878-14884.

Institution fields

Peer reviewed: yes
First author: Riley
Co-authors: Nicholas M. Riley; Stacy A. Malaker; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Electron-based dissociation is needed for O-glycopeptides derived from OpeRATOR proteolysis	Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR ProteolysisElectron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR ProteolysisElectron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR ProteolysisElectron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis	Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis
year cv	2020	2020202020202020	2020
venue crossref	Analytical Chemistry	Analytical ChemistryChemRxivChemRxivChemRxiv	Analytical Chemistry
kind cv	article	articleworking_paperworking_paperworking_paper	other
DOI crossref	10.1021/acs.analchem.0c02950	10.1021/acs.analchem.0c0295010.26434/chemrxiv.12643220.v110.26434/chemrxiv.12643220.v210.26434/chemrxiv.12643220
preprint DOI openalex		10.26434/chemrxiv.12643220.v110.26434/chemrxiv.12643220.v210.26434/chemrxiv.12643220
first author openalex	Riley	RileyRileyRileyRiley	Riley

Also recorded as

W4238215270 (DOI 10.26434/chemrxiv.12643220.v2) · preprint · 2020 Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis
W4247027731 (DOI 10.26434/chemrxiv.12643220) · preprint · 2020 Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis

Citations

OpenAlex: 60
Scholar: 61
DOI: 10.1021/acs.analchem.0c02950
OpenAlex: W3095525715

Match decisions

doi merged · 1.00 · Run 18

2020 Metabolic precision labeling enables selective probing of O-linked N-acetylgalactosamine glycosylation Proceedings of the National Academy of Sciences article journal CV OA GS

CV span

lines 343–350 · CV · published

34316. Marjoke F. Debets, Omur Y. Yastan, Simon P. Wisnovsky, Stacy A. Malaker, Nikolaos Angelis, Leonhard K.R.344Moeckl, Junwon Choi, Helen Flynn, Lauren J.S. Wagner, Ganka Bineva-Todd, Aristotelis Antononopoulos, Anna345Cioce, William M. Browne, Zhen Li, David C. Briggs, Holly L. Douglas, Gaelen T. Hess, Anthony J. Agbay, Chloe346Roustan, Svend Kjaer, Stuart M. Haslam, Ambrosius P. Snijders, Michael C. Bassik, W.E. Moerner, Vivian S.W. Li,347Carolyn R. Bertozzi, and Benjamin Schumann. Metabolic precision labeling enables selective probing of O-linked N-348349acetylgalactosamine glycosylation. Proceedings of the National Academy of Sciences USA. 2020, 117(41); 25293-35025301.

Institution fields

Peer reviewed: yes
First author: Debets
Co-authors: Marjoke F. Debets; Omur Y. Yastan; Simon P. Wisnovsky; Stacy A. Malaker; Nikolaos Angelis; Leonhard K.R. Moeckl; Junwon Choi; Helen Flynn; Lauren J.S. Wagner; Ganka Bineva-Todd; Aristotelis Antononopoulos; Anna Cioce; William M. Browne; Zhen Li; David C. Briggs; Holly L. Douglas; Gaelen T. Hess; Anthony J. Agbay; Chloe Roustan; Svend Kjaer; Stuart M. Haslam; Ambrosius P. Snijders; Michael C. Bassik; W.E. Moerner; Vivian S.W. Li; Carolyn R. Bertozzi; Benjamin Schumann
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Metabolic precision labeling enables selective probing of O-linked N-acetylgalactosamine glycosylation	Metabolic precision labeling enables selective probing of O-linked N -acetylgalactosamine glycosylationMetabolic precision labeling enables selective probing of O-linked N -acetylgalactosamine glycosylation	Metabolic precision labeling enables selective probing of O-linked N-acetylgalactosamine glycosylation
year cv	2020	20202020	2020
venue crossref	Proceedings of the National Academy of Sciences USA	bioRxiv (Cold Spring Harbor Laboratory)Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences USA	Proceedings of the National Academy of Sciences
kind cv	article	working_paperarticle	other
DOI crossref	10.1073/pnas.2007297117	10.1101/2020.04.23.05720810.1073/pnas.2007297117
preprint DOI openalex		10.1101/2020.04.23.057208
first author openalex	Debets	DebetsDebets	Debets

Citations

OpenAlex: 96
Scholar: 107
OpenAlex with related records: 99
DOI: 10.1073/pnas.2007297117
OpenAlex: W3089626965

Match decisions

doi merged · 1.00 · Run 18

2020 Methods Matter -- Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors Molecular Therapy - Methods & Clinical Development article journal CV OA GS

CV span

lines 352–355 · CV · published

35215. Neil G. Rumachik, Stacy A. Malaker, Nicole Poweleit, Lucy Maynard, Christopher M. Adams, Ryan Leib, Giana353Cirolia, Dennis Thomas, Susan Stamnes, Kathleen Holt, Patrick Sinn, Joseph L. DeRisi, Andrew P. May, and Nicole354K. Paulk. Methods Matter -- Standard Production Platforms for Recombinant AAV Produce Chemically and355Functionally Distinct Vectors. Molecular Therapy: Methods & Clinical Development. 2020; 18:98-118.

Institution fields

Peer reviewed: yes
First author: Rumachik
Co-authors: Neil G. Rumachik; Stacy A. Malaker; Nicole Poweleit; Lucy Maynard; Christopher M. Adams; Ryan Leib; Giana Cirolia; Dennis Thomas; Susan Stamnes; Kathleen Holt; Patrick Sinn; Joseph L. DeRisi; Andrew P. May; Nicole K. Paulk
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Methods Matter -- Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors	Methods Matter -- Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct VectorsMethods Matter: Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors	Methods Matter--Standard Production Platforms for Recombinant AAV Produce Chemically and Functionally Distinct Vectors
year cv	2020	20192020	2020
venue crossref	Molecular Therapy: Methods & Clinical Development	bioRxiv (Cold Spring Harbor Laboratory)Molecular Therapy — Methods & Clinical Development	Molecular Therapy-Methods & Clinical Development	Molecular Therapy - Methods & Clinical Development
kind cv	article	working_paperarticle	other
DOI crossref	10.1016/j.omtm.2020.05.018	10.1101/64016910.1016/j.omtm.2020.05.018
preprint DOI openalex		10.1101/640169
first author openalex	Rumachik	RumachikRumachik	Rumachik

Citations

OpenAlex: 148
Scholar: 195
OpenAlex with related records: 159
DOI: 10.1016/j.omtm.2020.05.018
OpenAlex: W3026609212

Match decisions

doi merged · 1.00 · Run 18

2020 Optimal dissociation methods differ for N- and O-glycopeptides Journal of Proteome Research article journal CV OA GS

CV span

lines 361–364 · CV · published

36113. Nicholas M. Riley, Stacy A. Malaker, Marc D. Driessen, and Carolyn R. Bertozzi. Optimal362dissociation methods differ for N- and O-glycopeptides. Journal of Proteome Research.3632020; 19(8): 3286-3301. Selected as ACS Editor’s Choice, Featured in JPR “Rising364Stars” special issue, Among JPR’s “Most Read Articles in 2020”

Institution fields

Peer reviewed: yes
First author: Riley
Co-authors: Nicholas M. Riley; Stacy A. Malaker; Marc D. Driessen; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Optimal dissociation methods differ for N- and O-glycopeptides	Optimal Dissociation Methods Differ for N - and O -GlycopeptidesOptimal Dissociation Methods Differ for N- and O-glycopeptidesOptimal Dissociation Methods Differ for N- and O-glycopeptidesOptimal Dissociation Methods Differ for N- and O-glycopeptides	Optimal Dissociation Methods Differ for N- and O-Glycopeptides
year cv	2020	2020202020202020	2020
venue crossref	Journal of Proteome Research	Journal of Proteome ResearchChemRxivChemRxivChemRxiv	Journal of proteome research
kind cv	article	articleworking_paperworking_paperworking_paper	other
DOI crossref	10.1021/acs.jproteome.0c00218	10.1021/acs.jproteome.0c0021810.26434/chemrxiv.12062685.v110.26434/chemrxiv.12062685.v210.26434/chemrxiv.12062685
preprint DOI openalex		10.26434/chemrxiv.12062685.v110.26434/chemrxiv.12062685.v210.26434/chemrxiv.12062685
first author openalex	Riley	RileyRileyRileyRiley	Riley

Also recorded as

W4229777077 (DOI 10.26434/chemrxiv.12062685.v2) · preprint · 2020 Optimal Dissociation Methods Differ for N- and O-glycopeptides
W4254283047 (DOI 10.26434/chemrxiv.12062685) · preprint · 2020 Optimal Dissociation Methods Differ for N- and O-glycopeptides

Citations

OpenAlex: 240
Scholar: 255
OpenAlex with related records: 246
DOI: 10.1021/acs.jproteome.0c00218
OpenAlex: W3034064336

Match decisions

doi merged · 1.00 · Run 18

2020 Targeted desialylation overcomes glyco-immune checkpoints and potentiates the anticancer immune response in vivo Nature Chemical Biology article journal CV OA GS

CV span

lines 335–338 · CV · published

33518. Melissa A. Gray, Michal A. Stanczak, Han Xiao, Johan F. A. Pijnenborg, Natalia R Mantuano, Stacy A. Malaker,336Payton A. Weidenbacher, Caitlyn L. Miller, Julia T. Tanzo, Green Ahn, Elliot C. Woods, Heinz Läubli, and Carolyn R.337Bertozzi. Targeted desialylation overcomes glyco-immune checkpoints and potentiates the anticancer immune338response in vivo. Nature Chemical Biology. 2020; doi.org/10.1038/s41589-020-0622-x

Institution fields

Peer reviewed: yes
First author: Gray
Co-authors: Melissa A. Gray; Michal A. Stanczak; Han Xiao; Johan F. A. Pijnenborg; Natalia R Mantuano; Stacy A. Malaker; Payton A. Weidenbacher; Caitlyn L. Miller; Julia T. Tanzo; Green Ahn; Elliot C. Woods; Heinz Läubli; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Targeted desialylation overcomes glyco-immune checkpoints and potentiates the anticancer immune response in vivo	Targeted Desialylation Overcomes Glyco-Immune Checkpoints and Potentiates the Anticancer Immune Response in VivoTargeted glycan degradation potentiates the anticancer immune response in vivoTargeted Desialylation Overcomes Glyco-Immune Checkpoints and Potentiates the Anticancer Immune Response in VivoTargeted Desialylation Overcomes Glyco-Immune Checkpoints and Potentiates the Anticancer Immune Response in Vivo	Targeted glycan degradation potentiates the anticancer immune response in vivo
year cv	2020	2019202020192019	2020
venue crossref	Nature Chemical Biology	ChemRxivNature Chemical BiologyChemRxivChemRxiv	Nature Chemical Biology
kind cv	article	working_paperarticleworking_paperworking_paper	other
DOI cv	10.1038/s41589-020-0622-x	10.26434/chemrxiv.8187146.v110.1038/s41589-020-0622-x10.26434/chemrxiv.8187146.v210.26434/chemrxiv.8187146
preprint DOI openalex		10.26434/chemrxiv.8187146.v110.26434/chemrxiv.8187146.v210.26434/chemrxiv.8187146
first author openalex	Gray	GrayGrayGrayGray	Gray

Also recorded as

W4233517730 (DOI 10.26434/chemrxiv.8187146.v2) · preprint · 2019 Targeted Desialylation Overcomes Glyco-Immune Checkpoints and Potentiates the Anticancer Immune Response in Vivo
W4242334738 (DOI 10.26434/chemrxiv.8187146) · preprint · 2019 Targeted Desialylation Overcomes Glyco-Immune Checkpoints and Potentiates the Anticancer Immune Response in Vivo

Citations

OpenAlex: 376
Scholar: 426
OpenAlex with related records: 382
DOI: 10.1038/s41589-020-0622-x
OpenAlex: W3048973619

Match decisions

doi merged · 1.00 · Run 18

2019 Engineering Orthogonal Polypeptide GalNAc-Transferase and UDP-Sugar Pairs Journal of the American Chemical Society article journal CV OA GS

CV span

lines 378–381 · CV · published

37810. Junwon Choi, Lauren J. S. Wagner, Suzanne B. P. E. Timmermans, Stacy A. Malaker, Benjamin Schumann, Melissa379A. Gray, Marjoke F. Debets, Megumi Takashima, Jase Gehring, and Carolyn R. Bertozzi. Engineering Orthogonal380Polypeptide GalNAc-Transferase and UDP-Sugar Pairs. Journal of the American Chemical Society. 2019; 141(34):38113442-13453.

Institution fields

Peer reviewed: yes
First author: Choi
Co-authors: Junwon Choi; Lauren J. S. Wagner; Suzanne B. P. E. Timmermans; Stacy A. Malaker; Benjamin Schumann; Melissa A. Gray; Marjoke F. Debets; Megumi Takashima; Jase Gehring; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Engineering Orthogonal Polypeptide GalNAc-Transferase and UDP-Sugar Pairs	Engineering Orthogonal Polypeptide GalNAc-Transferase and UDP-Sugar PairsEngineering Orthogonal Polypeptide GalNAc-Transferase and UDP-Sugar PairsEngineering Orthogonal Polypeptide GalNAc-Transferase and UDP-Sugar Pairs	Engineering orthogonal polypeptide GalNAc-Transferase and UDP-Sugar pairs
year cv	2019	201920192019	2019
venue crossref	Journal of the American Chemical Society	Journal of the American Chemical SocietyChemRxivChemRxiv	Journal of the American Chemical Society
kind cv	article	articleworking_paperworking_paper	other
DOI crossref	10.1021/jacs.9b04695	10.1021/jacs.9b0469510.26434/chemrxiv.8123486.v110.26434/chemrxiv.8123486
preprint DOI openalex		10.26434/chemrxiv.8123486.v110.26434/chemrxiv.8123486
first author openalex	Choi	ChoiChoiChoi	Choi

Also recorded as

W4253997085 (DOI 10.26434/chemrxiv.8123486) · preprint · 2019

Citations

OpenAlex: 81
Scholar: 84
DOI: 10.1021/jacs.9b04695
OpenAlex: W2965911725

Match decisions

doi merged · 1.00 · Run 18

2019 Identification of class i mhc associated glycopeptides as targets for cancer immunotherapy US Patent App article CV OA GS needs review

CV span

lines 468–469 · CV · unverified · published

4686. Identification of class I MHC associated glycopeptides as targets for cancer immunotherapy. Donald F. Hunt, Jeffrey469Shabanowitz, Stacy A. Malaker, Mark Cobbold, and Sarah Penny. US Provisional Patent Number 15/750,607.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Stacy A. Malaker; Mark Cobbold; Sarah Penny
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar
title scholar	Identification of class I MHC associated glycopeptides as targets for cancer immunotherapy	Identification of class i mhc associated glycopeptides as targets for cancer immunotherapy
year scholar		2019
venue scholar		US Patent App.
kind scholar	other	other
first author cv	Hunt	Hunt

Citations

OpenAlex: none
Scholar: 4

Match decisions

fingerprint merged · 1.00 · Run 18

2019 Isolation of Major Histocompatibility Complex (MHC)-Associated Peptides by Immunoaffinity Purification Methods in Molecular Biology chapter CV OA GS

CV span

lines 392–394 · CV · published

3927. Invited book chapter: Sarah A. Penny and Stacy A. Malaker*. Isolation of Major Histocompatibility Complex393(MHC)-Associated Peptides by Immunoaffinity Purification. In: Fulton K., Twine S. (eds) Immunoproteomics.394Methods in Molecular Biology, 2019, vol 2024. Humana, New York, NY

Institution fields

Peer reviewed: yes
First author: Penny
Co-authors: Sarah A. Penny; Stacy A. Malaker
Subfield: other
Method: none
Invited: yes
Publisher: Humana, New York, NY
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Isolation of Major Histocompatibility Complex (MHC)-Associated Peptides by Immunoaffinity Purification	Isolation of Major Histocompatibility Complex (MHC)-Associated Peptides by Immunoaffinity Purification	Isolation of major histocompatibility complex (MHC)-associated peptides by immunoaffinity purification
year cv	2019	2019	2019
venue crossref	Immunoproteomics. Methods in Molecular Biology	Methods in molecular biology	Immunoproteomics: Methods and Protocols	Methods in Molecular Biology
kind cv	chapter	chapter	other
DOI crossref	10.1007/978-1-4939-9597-4_14	10.1007/978-1-4939-9597-4_14
first author openalex	Penny	Penny	Penny

Citations

OpenAlex: 3
Scholar: 4
DOI: 10.1007/978-1-4939-9597-4_14
OpenAlex: W2966496111

Match decisions

doi merged · 1.00 · Run 18

2019 Mass Spectrometric Identification and Molecular Modeling of Glycopeptides Presented by MHC Class I and II Processing Pathways Methods in Molecular Biology chapter CV OA GS

CV span

lines 388–390 · CV · published

3888. Invited book chapter: Stacy A. Malaker* and Michael J. Ferracane. Mass Spectrometric Identification and389Molecular Modeling of Glycopeptides Presented by MHC Class I and II Processing Pathways. In: Fulton K., Twine390S. (eds) Immunoproteomics. Methods in Molecular Biology, 2019, vol 2024. Humana, New York, NY

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malaker; Michael J. Ferracane
Subfield: other
Method: none
Invited: yes
Publisher: Humana, New York, NY
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Mass Spectrometric Identification and Molecular Modeling of Glycopeptides Presented by MHC Class I and II Processing Pathways	Mass Spectrometric Identification and Molecular Modeling of Glycopeptides Presented by MHC Class I and II Processing Pathways	Mass spectrometric identification and molecular modeling of glycopeptides presented by MHC class I and II processing pathways
year cv	2019	2019	2019
venue crossref	Immunoproteomics. Methods in Molecular Biology	Methods in molecular biology	Immunoproteomics: Methods and Protocols	Methods in Molecular Biology
kind cv	chapter	chapter	other
DOI crossref	10.1007/978-1-4939-9597-4_17	10.1007/978-1-4939-9597-4_17
first author openalex	Malaker	Malaker	Malaker

Citations

OpenAlex: 5
Scholar: 7
DOI: 10.1007/978-1-4939-9597-4_17
OpenAlex: W2966000148

Match decisions

doi merged · 1.00 · Run 18

2019 Target peptides for cancer therapy and diagnostics US Patent App version 2022 Target peptides for cancer therapy and diagnostics article CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	CV	OpenAlex	Scholar
title scholar			Target peptides for cancer therapy and diagnostics
year scholar			2019
venue scholar			US Patent App.
kind scholar			other
first author scholar			Hunt

Citations

OpenAlex: none
Scholar: 1

Match decisions

No decision recorded; a single record.

2019 The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins Proceedings of the National Academy of Sciences article journal CV OA GS

CV span

lines 383–386 · CV · published

3839. Stacy A. Malakerǂ, Kayvon Pedramǂ, Michael J. Ferracane, Barbara A. Bensing, Venkatesh Krishnan, Christian384Pett, Jin Yu, Elliot C. Woods, Jessica R. Kramer, Ulrika Westerlind, Oliver Dorigo, and Carolyn R. Bertozzi. The mucin-385selective protease StcE enables molecular and functional analysis of human cancer-associated mucins. Proceedings386of the National Academy of Sciences USA. 2019, 116(15): 7278-7287. Featured in ChEM-H News

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malaker; Kayvon Pedram; Michael J. Ferracane; Barbara A. Bensing; Venkatesh Krishnan; Christian Pett; Jin Yu; Elliot C. Woods; Jessica R. Kramer; Ulrika Westerlind; Oliver Dorigo; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins	The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins	The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins
year cv	2019	2019	2019
venue crossref	Proceedings of the National Academy of Sciences USA	Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences	Proceedings of the National Academy of Sciences
kind cv	article	article	other
DOI crossref	10.1073/pnas.1813020116	10.1073/pnas.1813020116
first author openalex	Malaker	Malaker	Malaker

Citations

OpenAlex: 299
Scholar: 313
DOI: 10.1073/pnas.1813020116
OpenAlex: W2924483954

Match decisions

doi merged · 1.00 · Run 18

2017 Canonical and Cross-reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C Frontiers in Immunology article journal CV OA GS

CV span

lines 412–415 · CV · published

4123. Malcolm JW Sim, Stacy A. Malaker, Ayesha Khan, Janet M. Stowell, Jeffrey Shabanowitz, Mary E. Peterson, Sumati413Rajagopalan, Donald F. Hunt, Daniel M. Altmann, Eric O. Long, and Rosemary J. Boyton. Canonical and Cross-414reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C.415Frontiers Immunology. 2017, 8(193).

Institution fields

Peer reviewed: yes
First author: Sim
Co-authors: Malcolm JW Sim; Stacy A. Malaker; Ayesha Khan; Janet M. Stowell; Jeffrey Shabanowitz; Mary E. Peterson; Sumati Rajagopalan; Donald F. Hunt; Daniel M. Altmann; Eric O. Long; Rosemary J. Boyton
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar	CrossRef
title cv	Canonical and Cross-reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C	Canonical and cross-reactive binding of NK cell inhibitory receptors to HLA-C allotypes is dictated by peptides bound to HLA-CCanonical and Cross-reactive Binding of NK Cell Inhibitory Receptors to HLA-C Allotypes Is Dictated by Peptides Bound to HLA-C	Canonical and cross-reactive binding of NK cell inhibitory receptors to HLA-C allotypes is dictated by peptides bound to HLA-C
year cv	2017	20162017	2017
venue crossref	Frontiers Immunology	bioRxiv (Cold Spring Harbor Laboratory)Frontiers in Immunology	Frontiers in immunology	Frontiers in Immunology
kind cv	article	working_paperarticle	other
DOI crossref	10.3389/fimmu.2017.00193	10.1101/09695810.3389/fimmu.2017.00193
preprint DOI openalex		10.1101/096958
first author openalex	Sim	SimSim	Sim

Citations

OpenAlex: 52
Scholar: 64
OpenAlex with related records: 57
DOI: 10.3389/fimmu.2017.00193
OpenAlex: W2952762050

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.3389/fimmu.2017.00193 for the Frontiers in Immunology paper.

2017 Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma Journal of Proteome Research article journal CV OA GS

CV span

lines 417–420 · CV · published

4172. Stacy A. Malaker, Michael J. Ferracane, Florence R. Depontieu, Angela L. Zarling, Jeffrey Shabanowitz, Dina L.418Bai, Suzanne Topalian, Victor H. Engelhard, and Donald F. Hunt. Identification and Characterization of Complex419Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma. Journal of Proteome420Research. 2017, 16(1): 228-237. Featured in JPR “Rising Stars” special issue

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malaker; Michael J. Ferracane; Florence R. Depontieu; Angela L. Zarling; Jeffrey Shabanowitz; Dina L. Bai; Suzanne Topalian; Victor H. Engelhard; Donald F. Hunt
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma	Identification and Characterization of Complex Glycosylated Peptides Presented by the MHC Class II Processing Pathway in Melanoma	Identification and characterization of complex glycosylated peptides presented by the MHC class II processing pathway in melanoma
year cv	2017	2016	2017
venue crossref	Journal of Proteome Research	Journal of Proteome Research	Journal of proteome research
kind cv	article	article	other
DOI crossref	10.1021/acs.jproteome.6b00496	10.1021/acs.jproteome.6b00496
first author openalex	Malaker	Malaker	Malaker

Citations

OpenAlex: 54
Scholar: 58
DOI: 10.1021/acs.jproteome.6b00496
OpenAlex: W2508250503

Match decisions

doi merged · 1.00 · Run 18

2017 Identification of glycopeptides as post-translationally modified neoantigens in leukemia Cancer Immunology Research article journal CV OA GS

CV span

lines 403–405 · CV · published

4035. Stacy A. Malakerǂ, Sarah A. Pennyǂ, Lora Steadman, Paisley T. Myers, Justin C. Loke, Manoj Raghavan, Dina L.404Bai, Jeffrey Shabanowitz, Donald F. Hunt, Mark Cobbold. Identification of glycopeptides as post-translationally405modified neoantigens in leukemia. Cancer Immunology Research. 2017, 5(5): 376-384.

Institution fields

Peer reviewed: yes
First author: Malaker
Co-authors: Stacy A. Malaker; Sarah A. Penny; Lora Steadman; Paisley T. Myers; Justin C. Loke; Manoj Raghavan; Dina L. Bai; Jeffrey Shabanowitz; Donald F. Hunt; Mark Cobbold
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Identification of glycopeptides as post-translationally modified neoantigens in leukemia	Identification of Glycopeptides as Posttranslationally Modified Neoantigens in Leukemia	Identification of glycopeptides as posttranslationally modified neoantigens in leukemia
year cv	2017	2017	2017
venue crossref	Cancer Immunology Research	Cancer Immunology Research	Cancer immunology research
kind cv	article	article	other
DOI crossref	10.1158/2326-6066.cir-16-0280	10.1158/2326-6066.cir-16-0280
first author openalex	Malaker	Malaker	Malaker

Citations

OpenAlex: 147
Scholar: 165
DOI: 10.1158/2326-6066.cir-16-0280
OpenAlex: W2596810175

Match decisions

doi merged · 1.00 · Run 18

2017 Peptide binding motifs of two common equine class I MHC molecules in thoroughbred horses Immunogenetics article journal CV OA GS

CV span

lines 407–410 · CV · published

4074. Tobias Bergmann, Mikaela Lindvall, Erin Moore, Eugene Moore, John Sidney, Donald Miller, Rebecca Tallmadge,408Paisley T. Myers, Stacy A. Malaker, Jeffrey Shabanowitz, Nikolaus Osterrieder, Bjoern Peters, Donald F. Hunt,409Douglas F. Antczak, and Alessandro Sette. Peptide binding motifs of two common equine class I MHC molecules in410thoroughbred horses. Immunogenetics. 2017; 69(5): 351-358.

Institution fields

Peer reviewed: yes
First author: Bergmann
Co-authors: Tobias Bergmann; Mikaela Lindvall; Erin Moore; Eugene Moore; John Sidney; Donald Miller; Rebecca Tallmadge; Paisley T. Myers; Stacy A. Malaker; Jeffrey Shabanowitz; Nikolaus Osterrieder; Bjoern Peters; Donald F. Hunt; Douglas F. Antczak; Alessandro Sette
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Peptide binding motifs of two common equine class I MHC molecules in thoroughbred horses	Peptide-binding motifs of two common equine class I MHC molecules in Thoroughbred horses	Peptide-binding motifs of two common equine class I MHC molecules in Thoroughbred horses
year cv	2017	2017	2017
venue crossref	Immunogenetics	Immunogenetics	Immunogenetics
kind cv	article	article	other
DOI crossref	10.1007/s00251-017-0978-6	10.1007/s00251-017-0978-6
first author openalex	Bergmann	Bergmann	Bergmann

Citations

OpenAlex: 2
Scholar: 2
DOI: 10.1007/s00251-017-0978-6
OpenAlex: W2595983908

Match decisions

doi merged · 1.00 · Run 18

2017 Shared binding specificities of HLA Class I and Class II Alleles Associate with Cutaneous Nevirapine Hypersensitivity and Identify Novel Risk Alleles Scientific Reports article journal CV OA GS

CV span

lines 396–401 · CV · published

3966. Rebecca Pavlos, Elizabeth J. McKinnon, David A. Ostrov, Bjoern Peters, Soren Buus, David Koelle, Abha Chopra,397Ryan Schutte, Craig Rive, Alec Redwood, Susana Restrepo, Austin Bracey, Thomas Kaever, Paisley T. Myers, Ellen398H. Spears, Stacy A. Malaker, Jeffrey Shabanowitz, Jing Yuan, Silvana Gaudieri, Donald F. Hunt, Mary Carrington,399David W. Haas, Simon Mallal, and Elizabeth J. Phillips. Shared binding specificities of HLA Class I and Class II Alleles400Associate with Cutaneous Nevirapine Hypersensitivity and Identify Novel Risk Alleles. Scientific Reports. 2017 Aug40117;7(1):8653. doi: 10.1038/s41598-017-08876-0.

Institution fields

Peer reviewed: yes
First author: Pavlos
Co-authors: Rebecca Pavlos; Elizabeth J. McKinnon; David A. Ostrov; Bjoern Peters; Soren Buus; David Koelle; Abha Chopra; Ryan Schutte; Craig Rive; Alec Redwood; Susana Restrepo; Austin Bracey; Thomas Kaever; Paisley T. Myers; Ellen H. Spears; Stacy A. Malaker; Jeffrey Shabanowitz; Jing Yuan; Silvana Gaudieri; Donald F. Hunt; Mary Carrington; David W. Haas; Simon Mallal; Elizabeth J. Phillips
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Shared binding specificities of HLA Class I and Class II Alleles Associate with Cutaneous Nevirapine Hypersensitivity and Identify Novel Risk Alleles	Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles	Shared peptide binding of HLA Class I and II alleles associate with cutaneous nevirapine hypersensitivity and identify novel risk alleles
year cv	2017	2017	2017
venue crossref	Scientific Reports	Scientific Reports	Scientific reports
kind cv	article	article	other
DOI cv	10.1038/s41598-017-08876-0	10.1038/s41598-017-08876-0
first author openalex	Pavlos	Pavlos	Pavlos

Citations

OpenAlex: 54
Scholar: 60
DOI: 10.1038/s41598-017-08876-0
OpenAlex: W2742753876

Match decisions

doi merged · 1.00 · Run 18

2016 Glycosylated and methylated peptides as neoantigens in leukaemia European Journal of Cancer article journal CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title openalex	Glycosylated and methylated peptides as neoantigens in leukaemia	Glycosylated and methylated peptides as neoantigens in leukaemia
year openalex	2016	2016
venue openalex	European Journal of Cancer	European Journal of Cancer
kind openalex	article	other
DOI openalex	10.1016/s0959-8049(16)61765-3
first author openalex	Penny	Penny

Citations

OpenAlex: 2
Scholar: 2
DOI: 10.1016/s0959-8049(16)61765-3
OpenAlex: W2470026249

Match decisions

fingerprint merged · 1.00 · Run 18

2014 Target peptides for immunotherapy and diagnostics CA Patent App. 2,883,569 A reprint 2024 Target peptides for immunotherapy and diagnosticsversion 2017 Target peptides for immunotherapy and diagnostics other CV OA GS needs review

CV span

lines 471–473 · CV · unverified · published

4715. Target peptides for immunotherapy and diagnostics. Donald F. Hunt, Jeffrey Shabanowitz, Stacy A. Malaker,472Victor H. Engelhard, Angela Zarling, Kara L. Cummings, Rebecca C. Obeng, and Mark Cobbold. Patent Number473US09561266.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Stacy A. Malaker; Victor H. Engelhard; Angela Zarling; Kara L. Cummings; Rebecca C. Obeng; Mark Cobbold
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar
title scholar	Target peptides for immunotherapy and diagnostics	Target peptides for immunotherapy and diagnostics
year scholar		2014
venue scholar		CA Patent App.
kind cv	other	other
first author cv	Hunt	Hunt

Citations

OpenAlex: none
Scholar: 1
Scholar with related records: 32

Match decisions

fingerprint merged · 1.00 · Run 18

2013 MHC Class I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia Science Translational Medicine article journal CV OA GS

CV span

lines 422–426 · CV · published

4221. Mark Cobbold, Hugo De La Pena, Andrew Norris, Joy Polefrone, James E. Turner, Jie Qian, A. Michelle English,423Jennifer G. Abelin, Stacy A. Malaker, Angela L. Zarling, Hsing-Wen Huang, Sarah Penny, Sylvie Freeman, Jeffrey424Shabanowitz, Guy Pratt, Charles Craddock, Michael E. Williams, Donald F. Hunt, and Victor H. Engelhard. MHC Class425I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia. Science Translational426Medicine. 5(203) 203ra125 (2013).

Institution fields

Peer reviewed: yes
First author: Cobbold
Co-authors: Mark Cobbold; Hugo De La Pena; Andrew Norris; Joy Polefrone; James E. Turner; Jie Qian; A. Michelle English; Jennifer G. Abelin; Stacy A. Malaker; Angela L. Zarling; Hsing-Wen Huang; Sarah Penny; Sylvie Freeman; Jeffrey Shabanowitz; Guy Pratt; Charles Craddock; Michael E. Williams; Donald F. Hunt; Victor H. Engelhard
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	MHC Class I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia	MHC Class I–Associated Phosphopeptides Are the Targets of Memory-like Immunity in Leukemia	MHC class I–associated phosphopeptides are the targets of memory-like immunity in leukemia
year cv	2013	2013	2013
venue crossref	Science Translational Medicine	Science Translational Medicine	Science translational medicine
kind cv	article	article	other
DOI crossref	10.1126/scitranslmed.3006061	10.1126/scitranslmed.3006061
first author openalex	Cobbold	Cobbold	Cobbold

Citations

OpenAlex: 208
Scholar: 283
DOI: 10.1126/scitranslmed.3006061
OpenAlex: W1976251709

Match decisions

doi merged · 1.00 · Run 18

Composition for treating and/or preventing cancer, e.g., leukemia comprises Class I Major Histocompatibility Complex associated glycopeptides other CV OA GS needs review

CV span

lines 484–486 · CV · unverified · published

4842. Composition for treating and/or preventing cancer, e.g., leukemia comprises Class I Major Histocompatibility485Complex associated glycopeptides. Donald F. Hunt, Jeffrey Shabanowitz, Stacy A. Malaker, Mark Cobbold, and486Sarah A. Penny. Patent Numbers WO2017027403-A1; CA2995103-A1; AU2016306304-A1.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Stacy A. Malaker; Mark Cobbold; Sarah A. Penny
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Composition for treating and/or preventing cancer, e.g., leukemia comprises Class I Major Histocompatibility Complex associated glycopeptides
kind cv	other
first author cv	Hunt

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

Composition for treating a proliferative disease comprises a tetanus peptide and synthetic target peptides other CV OA GS needs review

CV span

lines 480–482 · CV · unverified · published

4803. Composition for treating a proliferative disease comprises a tetanus peptide and synthetic target peptides. Donald481F. Hunt, Jeffrey Shabanowitz, Stacy A. Malaker, Victor H. Engelhard, Angela Zarling, Kara L. Cummings, Rebecca482C. Obeng, and Mark Cobbold. Patent Number WO2015034519-A1.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Stacy A. Malaker; Victor H. Engelhard; Angela Zarling; Kara L. Cummings; Rebecca C. Obeng; Mark Cobbold
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Composition for treating a proliferative disease comprises a tetanus peptide and synthetic target peptides
kind cv	other
first author cv	Hunt

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

Composition useful for treating hepatocellular carcinoma and esophageal cancer, comprises synthetic target peptides comprising specific amino acid sequences other CV OA GS needs review

CV span

lines 488–490 · CV · unverified · published

4881. Composition useful for treating hepatocellular carcinoma and esophageal cancer, comprises synthetic target489peptides comprising specific amino acid sequences. Donald F. Hunt, Jeffrey Shabanowitz, Paisley T. Myers, Mark490Cobbold, Nico Buttner, Stacy A. Malaker, Sarah A. Penny. Patent Number WO02017192969-A1.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Paisley T. Myers; Mark Cobbold; Nico Buttner; Stacy A. Malaker; Sarah A. Penny
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Composition useful for treating hepatocellular carcinoma and esophageal cancer, comprises synthetic target peptides comprising specific amino acid sequences
kind cv	other
first author cv	Hunt

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

Composition useful for treating or preventing cancer and melanoma in patient comprises synthetic target peptides other CV OA GS needs review

CV span

lines 475–478 · CV · unverified · published

4754. Composition useful for treating or preventing cancer and melanoma in patient comprises synthetic target peptides.476Donald F. Hunt, Jeffrey Shabanowitz, Stacy A. Malaker, Victor H. Engelhard, Angela Zarling, Kara L. Cummings,477Rebecca C. Obeng, and Mark Cobbold. Patent Numbers WO2014036562-A2, WO2014036562-A3, CA2883569-A1,478AU2013308409-A1, EP2897631-A2, US2015224182-A1, HK1212237-A0, US9561266-B2, US2017333541-A1.

Institution fields

Peer reviewed: none
First author: Hunt
Co-authors: Donald F. Hunt; Jeffrey Shabanowitz; Stacy A. Malaker; Victor H. Engelhard; Angela Zarling; Kara L. Cummings; Rebecca C. Obeng; Mark Cobbold
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Composition useful for treating or preventing cancer and melanoma in patient comprises synthetic target peptides
kind cv	other
first author cv	Hunt

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

In progress

14 items in progress, under review, forthcoming or a working paper · not counted as publications

2026 B3GNT7 regulates mucin glycosylation and protects against colitis and infection bioRxiv article CV OA GS

CV span

lines 459–462 · CV · under_review

4591. Mary W.N. Burns, Joann Chongsaritsinsuk, Daniel C. Propheter, Jianyi Yin, Vivian Zuo, Chin Huang, Lan Peng, Kelly460A. Ruhn, Kelley W. Moremen, Ezra Burstein, Lora V. Hooper, Stacy A. Malaker, and Jennifer J. Kohler. B3GNT7461regulates mucin glycosylation and protects against colitis and infection. 2026, Under Review. bioRxiv:462doi.org/10.64898/2026.05.18.725942

Institution fields

Peer reviewed: no
First author: Burns
Co-authors: Mary W.N. Burns; Joann Chongsaritsinsuk; Daniel C. Propheter; Jianyi Yin; Vivian Zuo; Chin Huang; Lan Peng; Kelly A. Ruhn; Kelley W. Moremen; Ezra Burstein; Lora V. Hooper; Stacy A. Malaker; Jennifer J. Kohler
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar
title cv	B3GNT7 regulates mucin glycosylation and protects against colitis and infection	B3GNT7 regulates mucin glycosylation and protects against colitis and infection
year cv	2026	2026
venue cv	bioRxiv	bioRxiv
kind cv	article	other
DOI cv	10.64898/2026.05.18.725942
first author cv	Burns	Burns

Citations

OpenAlex: none
Scholar: none
DOI: 10.64898/2026.05.18.725942

Match decisions

fingerprint merged · 1.00 · Run 18

2026 Mapping galectin-3 ligands in human tear fluid establishes spliceoform-dependent lacritin binding Communications Biology article CV OA GS

CV span

lines 82–84 · CV · forthcoming

8268. Vincent Chang, Isaac Lian, Ali Reza Afshari, Jeff Romano, Keira E. Mahoney, Ryan J. Chen, Niclas G. Karlsson,83Gordon W. Laurie, and Stacy A. Malaker*. Lacritin as a novel spliceoform-specific ligand for galectin-3 in tear84fluid. 2026, Communications Biology. In Press. bioRXiv: doi.org/10.1101/2025.11.24.690288

Institution fields

Peer reviewed: yes
First author: Chang
Co-authors: Vincent Chang; Isaac Lian; Ali Reza Afshari; Jeff Romano; Keira E. Mahoney; Ryan J. Chen; Niclas G. Karlsson; Gordon W. Laurie; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title scholar	Lacritin as a novel spliceoform-specific ligand for galectin-3 in tear fluid	Mapping galectin-3 ligands in tear fluid establishes spliceoform-dependent lacritin binding	Mapping galectin-3 ligands in human tear fluid establishes spliceoform-dependent lacritin binding
year scholar	2026	2025	2026
venue scholar	Communications Biology	bioRxiv (Cold Spring Harbor Laboratory)	Communications Biology
kind cv	article	working_paper	other
DOI cv	10.1101/2025.11.24.690288	10.1101/2025.11.24.690288
preprint DOI	10.1101/2025.11.24.690288	10.1101/2025.11.24.690288
first author scholar	Chang	Chang	Chang

Citations

OpenAlex: 0
Scholar: 2
DOI: 10.1101/2025.11.24.690288
OpenAlex: W4416715195

Match decisions

doi merged · 1.00 · Run 18

2026 PP2-A13 is essential for dark-activated glycoprotein quality control in plants article CV OA GS

CV span

lines 448–449 · CV · under_review

4484. Morgan Vanderwall, Wei Liu, Rebecca Schultz, Sarah C. Lowery, Stacy A. Malaker, Joshua M. Gendron. PP2-A13449is essential for dark-activated glycoprotein quality control in plants. 2026, In Revision.

Institution fields

Peer reviewed: none
First author: Vanderwall
Co-authors: Morgan Vanderwall; Wei Liu; Rebecca Schultz; Sarah C. Lowery; Stacy A. Malaker; Joshua M. Gendron
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	PP2-A13 is essential for dark-activated glycoprotein quality control in plants
year cv	2026
kind cv	article
first author cv	Vanderwall

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

2026 Site-specific O-glycans dictate lacritin multimerization in tears bioRXiv article CV OA GS

CV span

lines 456–457 · CV · under_review

4562. Vincent Chang, Ryan Chen, Isaac Lian, Keira E. Mahoney, Gordon Laurie, and Stacy A. Malaker*. Site-specific O-457glycans dictate lacritin multimerization in tears. 2026, Under Review. bioRXiv: doi.org/10.64898/2026.03.30.715376

Institution fields

Peer reviewed: no
First author: Chang
Co-authors: Vincent Chang; Ryan Chen; Isaac Lian; Keira E. Mahoney; Gordon Laurie; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Site-specific O-glycans dictate lacritin multimerization in tears	Site-specific O-glycans influence lacritin structure and multimerization in tears	Site-specific O-glycans influence lacritin structure and multimerization in tears
year cv	2026	2026	2026
venue cv	bioRXiv	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind cv	article	working_paper	other
DOI cv	10.64898/2026.03.30.715376	10.64898/2026.03.30.715376
preprint DOI		10.64898/2026.03.30.715376
first author cv	Chang	Chang	Chang

Citations

OpenAlex: 1
Scholar: none
DOI: 10.64898/2026.03.30.715376
OpenAlex: W7148254594

Match decisions

doi merged · 1.00 · Run 18

2026 Transcriptome, glycome, and mucinome screening reveal zinc is essential for the composition of mucus in human goblet cells Scientific Reports article journal CV OA GS

CV span

lines 451–454 · CV · under_review

4513. Christoph Schüßler, Nara Chung, Renaud Léonard, Heike Sprenger, Tari Rödel, Susanne Thomsen, Marvin Wolf,452Willy Morelle, Keira E. Mahoney, François Foulquier, Albert Braeuning, Catherine Robbe Masselot, Stacy A.453Malaker, and Maria Maares. Transcriptome, glycome, and mucinome screening reveal zinc is essential for the454composition of mucus in human goblet cells. 2026, Under Review.

Institution fields

Peer reviewed: none
First author: Schüßler
Co-authors: Christoph Schüßler; Nara Chung; Renaud Léonard; Heike Sprenger; Tari Rödel; Susanne Thomsen; Marvin Wolf; Willy Morelle; Keira E. Mahoney; François Foulquier; Albert Braeuning; Catherine Robbe Masselot; Stacy A. Malaker; Maria Maares
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar	CrossRef
title cv	Transcriptome, glycome, and mucinome screening reveal zinc is essential for the composition of mucus in human goblet cells	Transcriptome, glycome, and mucinome analysis reveal zinc is essential for the composition of mucus in the human goblet cell model HT-29-MTX
year cv	2026	2026
venue crossref		Scientific Reports	Scientific Reports
kind cv	article	other
DOI crossref	10.1038/s41598-026-66227-4
first author cv	Schüßler	Schüßler

Citations

OpenAlex: none
Scholar: none
DOI: 10.1038/s41598-026-66227-4

Match decisions

fingerprint merged · 1.00 · Run 18

2025 Fractalkine/CX3CL1 Functions as a Transmembrane Receptor to Promote Transendothelial Migration through biomolecular condensation The Journal of Immunology article journal CV OA GS

CV span

lines 436–438 · CV · under_review

4367. Kazuki Sato, Elizabeth Browne, Jiang Lyu, Yiwei Xiong, Longhui Zeng, Stacy A Malaker, and Xiaolei Su.437Fractalkine/CX3CL1 Functions as a Transmembrane Receptor to Promote Transendothelial Migration through438biomolecular condensation. 2025, In Revision.

Institution fields

Peer reviewed: none
First author: Sato
Co-authors: Kazuki Sato; Elizabeth Browne; Jiang Lyu; Yiwei Xiong; Longhui Zeng; Stacy A Malaker; Xiaolei Su
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	CrossRef
title cv	Fractalkine/CX3CL1 Functions as a Transmembrane Receptor to Promote Transendothelial Migration through biomolecular condensation
year cv	2025
venue crossref		The Journal of Immunology
kind cv	article
DOI crossref	10.1093/jimmun/vkag141.394
first author cv	Sato

Citations

OpenAlex: none
Scholar: none
DOI: 10.1093/jimmun/vkag141.394

Match decisions

No decision recorded; a single record.

2025 O-glycosylation regulates proteolysis of the native tear peptidome chemRXiv article CV OA GS

CV span

lines 445–446 · CV · under_review

4455. Vincent Chang‡, Ryan Chen‡, Isaac Lian, Keira E. Mahoney, and Stacy A. Malaker*. O-glycosylation regulates446proteolysis of the native tear peptidome. 2025, In Revision. chemRXiv: doi.org/10.26434/chemrxiv-2026-tfnth

Institution fields

Peer reviewed: no
First author: Chang
Co-authors: Vincent Chang‡; Ryan Chen‡; Isaac Lian; Keira E. Mahoney; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex
title cv	O-glycosylation regulates proteolysis of the native tear peptidome	O-glycosylation affects proteolysis of the native tear peptidome
year cv	2025	2026
venue cv	chemRXiv	ChemRxiv
kind cv	article	working_paper
DOI cv	10.26434/chemrxiv-2026-tfnth	10.26434/chemrxiv-2026-tfnth
preprint DOI	10.26434/chemrxiv-2026-tfnth	10.26434/chemrxiv-2026-tfnth
first author openalex	Chang	Chang

Citations

OpenAlex: 1
Scholar: none
DOI: 10.26434/chemrxiv-2026-tfnth
OpenAlex: W7118923333

Match decisions

gemini merged · 1.00 · Run 18 These records share the same DOI 10.1021/jacsau.6c00834 for the JACS Au publication.

2025 Region-specific proteomic analysis of aging rhesus macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment strategies for … bioRxiv, 2025.11 article CV OA GS

CV span

lines 440–443 · CV · under_review

4406. Alexandra D. Steigmeyer, Alexandria S. Battison, Iris R. Liebman, Christopher H. van Dyck, Barbara S. Slusher, Amy441F. T. Arnsten, Stacy A. Malaker*, and Dibyadeep Datta*. Region-specific proteomic analysis of aging rhesus442macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment443strategies for sporadic Alzheimer’s disease. 2025, Under Review. bioRXiV: doi.org/10.1101/2025.11.07.687004

Institution fields

Peer reviewed: no
First author: Steigmeyer
Co-authors: Alexandra D. Steigmeyer; Alexandria S. Battison; Iris R. Liebman; Christopher H. van Dyck; Barbara S. Slusher; Amy F. T. Arnsten; Stacy A. Malaker*; Dibyadeep Datta*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title scholar	Region-specific proteomic analysis of aging rhesus macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment strategies for sporadic Alzheimer’s disease	Region-specific proteomic analysis of aging rhesus macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment strategies for sporadic Alzheimer’s disease	Region-specific proteomic analysis of aging rhesus macaques following chronic glutamate-carboxypeptidase-II (GCPII) inhibition elucidates potential treatment strategies for …
year scholar	2025	2025	2025
venue scholar	bioRXiV	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind scholar	article	working_paper	other
DOI cv	10.1101/2025.11.07.687004	10.1101/2025.11.07.687004
preprint DOI	10.1101/2025.11.07.687004	10.1101/2025.11.07.687004
first author scholar	Steigmeyer	Steigmeyer	Steigmeyer

Citations

OpenAlex: 0
Scholar: none
DOI: 10.1101/2025.11.07.687004
OpenAlex: W4416087573

Match decisions

doi merged · 1.00 · Run 18

2024 Second community evaluation of glycoproteomic informatics solutions Nature Methods article journal CV OA GS

CV span

lines 171–175 · CV · forthcoming

17150. Nicholas M. Riley*, Keira E. Mahoney, Nara Chung, Vincent Chang, Valentina Rangel-Angarita, Devon Kohler, Kiyoko172Aoki-Kinoshita, Frédérique Lisacek, Nichollas E. Scott, Stacy A. Malaker*. Second community evaluation of173174glycoproteomic informatics solutions. Nature Methods. 2024, Accepted in principle, study ongoing.175doi.org/10.6084/m9.figshare.27095782.v1

Institution fields

Peer reviewed: yes
First author: Riley
Co-authors: Nicholas M. Riley*; Keira E. Mahoney; Nara Chung; Vincent Chang; Valentina Rangel-Angarita; Devon Kohler; Kiyoko Aoki-Kinoshita; Frédérique Lisacek; Nichollas E. Scott; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	Scholar
title cv	Second community evaluation of glycoproteomic informatics solutions	Second community evaluation of glycoproteomic informatics solutions
year cv	2024	2024
venue cv	Nature Methods
kind cv	article	other
DOI cv	10.6084/m9.figshare.27095782.v1
first author cv	Riley	Riley

Citations

OpenAlex: none
Scholar: none
DOI: 10.6084/m9.figshare.27095782.v1

Match decisions

fingerprint merged · 1.00 · Run 18

2023 Loss of cis-PTase function in the liver promotes a highly penetrant form of fatty liver disease that rapidly transitions to hepatocellular carcinoma bioRxiv working paper CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title scholar	Loss of cis-PTase function in the liver promotes a highly penetrant form of fatty liver disease that rapidly transitions to hepatocellular carcinoma	Loss of cis-PTase function in the liver promotes a highly penetrant form of fatty liver disease that rapidly transitions to hepatocellular carcinoma
year scholar	2023	2023
venue scholar	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind openalex	working_paper	other
DOI openalex	10.1101/2023.11.13.566870
preprint DOI	10.1101/2023.11.13.566870
first author scholar	Singh	Singh

Citations

OpenAlex: 1
Scholar: 1
DOI: 10.1101/2023.11.13.566870
OpenAlex: W4388692049

Match decisions

preprint merged · 1.00 · Run 18

2023 Mucinases The Encyclopedia of Glycobiology chapter CV OA GS

CV span

lines 433–434 · CV · under_review

4338. Taryn M. Lucas and Stacy A. Malaker*. Mucinases. In: Kiyoko F. Aoki-Kinoshita (ed) The Encyclopedia of434Glycobiology. NCBI Bookshelf, 2023.

Institution fields

Peer reviewed: none
First author: Lucas
Co-authors: Taryn M. Lucas; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: NCBI Bookshelf
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	Mucinases
year cv	2023
venue cv	The Encyclopedia of Glycobiology
kind cv	chapter
first author cv	Lucas

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

2023 O-glycoproteases The Encyclopedia of Glycobiology chapter CV OA GS

CV span

lines 430–431 · CV · under_review

4309. Taryn M. Lucas and Stacy A. Malaker*. O-glycoproteases. In: Kiyoko F. Aoki-Kinoshita (ed) The Encyclopedia of431Glycobiology. NCBI Bookshelf, 2023.

Institution fields

Peer reviewed: none
First author: Lucas
Co-authors: Taryn M. Lucas; Stacy A. Malaker*
Subfield: other
Method: none
Invited: none
Publisher: NCBI Bookshelf
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title cv	O-glycoproteases
year cv	2023
venue cv	The Encyclopedia of Glycobiology
kind cv	chapter
first author cv	Lucas

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

2019 Chemical precision glyco-mutagenesis by glycosyltransferase engineering in living cells bioRxiv working paper CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	OpenAlex	Scholar
title scholar	Chemical precision glyco-mutagenesis by glycosyltransferase engineering in living cells	Chemical precision glyco-mutagenesis by glycosyltransferase engineering in living cells
year scholar	2019	2019
venue scholar	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind openalex	working_paper	other
DOI openalex	10.1101/669861
preprint DOI	10.1101/669861
first author scholar	Schumann	Schumann

Citations

OpenAlex: 5
Scholar: 5
DOI: 10.1101/669861
OpenAlex: W2952228524

Match decisions

preprint merged · 1.00 · Run 18

2019 Mammalian Y RNAs are modified at discrete guanosine residues with N-glycans bioRxiv working paper CV OA GS needs review

CV span

lines 373–376 · CV · unverified · published

37311. Ryan A. Flynn, Benjamin A.H. Smith, Alex Johnson, Kayvon Pedram, Benson M. George, Stacy A. Malaker, Karim374Majzoub, Jan E. Carette, and Carolyn R. Bertozzi. Mammalian Y-RNAs are glycosylated at discrete guanosine375residues with N-type glycans. bioRXiv 787614: doi.org/10.1101/787614 Featured in Science News, C&E News,376The Scientist, and Science Translational Medicine

Institution fields

Peer reviewed: no
First author: Flynn
Co-authors: Ryan A. Flynn; Benjamin A.H. Smith; Alex Johnson; Kayvon Pedram; Benson M. George; Stacy A. Malaker; Karim Majzoub; Jan E. Carette; Carolyn R. Bertozzi
Subfield: other
Method: none
Invited: none
Publisher: none
Reprint or translation: none

Fields by source

Field	CV	OpenAlex	Scholar
title scholar	Mammalian Y-RNAs are glycosylated at discrete guanosine residues with N-type glycans	Mammalian Y RNAs are modified at discrete guanosine residues with N-glycans	Mammalian Y RNAs are modified at discrete guanosine residues with N-glycans
year scholar		2019	2019
venue scholar	bioRXiv	bioRxiv (Cold Spring Harbor Laboratory)	bioRxiv
kind openalex	working_paper	working_paper	other
DOI openalex	10.1101/787614	10.1101/787614
preprint DOI	10.1101/787614	10.1101/787614
first author scholar	Flynn	Flynn	Flynn

Citations

OpenAlex: 15
Scholar: 23
DOI: 10.1101/787614
OpenAlex: W2977208128

Match decisions

doi merged · 1.00 · Run 18

Not counted

2 items · dissertations, talks, media, datasets · listed, not counted as publications

Critical Evaluation of “Zwitterionic Hydrophilic Interaction Liquid Chromatography (ZIC-HILIC and ZIC-cHILIC) Provide High Resolution Separation and Increase Sensitivity in … incomplete not counted CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	CV	OpenAlex	Scholar
title scholar			Critical Evaluation of “Zwitterionic Hydrophilic Interaction Liquid Chromatography (ZIC-HILIC and ZIC-cHILIC) Provide High Resolution Separation and Increase Sensitivity in …
kind scholar			other
first author scholar			Malaker

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

α-N-terminal Methylation of Saccharomycescerevisiae Histone H2B incomplete not counted CV OA GS Scholar only

CV span

Not in the CV.

Fields by source

Field	CV	OpenAlex	Scholar
title scholar			α-N-terminal Methylation of Saccharomycescerevisiae Histone H2B
kind scholar			other
first author scholar			Malaker

Citations

OpenAlex: none
Scholar: none

Match decisions

No decision recorded; a single record.

Positions

8 from the CV · current position answer · Scholar affiliation

Title	Organization	Years	Rank	Source	Lines
Associate Professor with tenure current	Department of Chemistry – Yale University	2026–	Associate tenured	CV	24, 26
Assistant Professor	Department of Chemistry – Yale University	2021–2025	Assistant	CV	25, 26
Postdoctoral Scholar	Department of Chemistry – Stanford University	2016–2020	Postdoc	CV	32, 33
Visiting Research Scientist	Prótéomique, Réponse Inflammatoire & Spectrométrie de Masse– Université de Lille1		Visiting visiting	CV	42, 43
Postdoctoral Research Associate	Department of Chemistry – University of Virginia	2014–2016	Postdoc	CV	50, 52
Graduate Research Associate	Department of Chemistry – University of Virginia	2010–2014	Research	CV	51, 52
Visiting Research Scientist	School of Immunity and Infection – University of Birmingham		Visiting visiting	CV	62, 63
Peptide Synthesis Chemist	Protein Structure Facility – University of Michigan	2005–2010	Unknown	CV	70, 72
Associate Professor with tenure			Associate tenured	CV current position	24
Associate Professor, Yale University			Associate	Scholar

Entries needing review

Mammalian Y-RNAs are glycosylated at discrete guanosine residues with N-type glycans
lines 373–376 · year_missing
Methods Employing Mucin-Specific Proteases
lines 465–466 · year_missing
Identification of class I MHC associated glycopeptides as targets for cancer immunotherapy
lines 468–469 · year_missing
Target peptides for immunotherapy and diagnostics
lines 471–473 · year_missing
Composition useful for treating or preventing cancer and melanoma in patient comprises synthetic target peptides
lines 475–478 · year_missing
Composition for treating a proliferative disease comprises a tetanus peptide and synthetic target peptides
lines 480–482 · year_missing
Composition for treating and/or preventing cancer, e.g., leukemia comprises Class I Major Histocompatibility Complex associated glycopeptides
lines 484–486 · year_missing
Composition useful for treating hepatocellular carcinoma and esophageal cancer, comprises synthetic target peptides comprising specific amino acid sequences
lines 488–490 · year_missing

Entries dropped by a reviewer

No dropped entries.

Google Scholar

Profile: Verified profile ↗

Rank

rank: Associate as of 2026
source: CV positions
title: Associate Professor with tenure
flags: tenured

Identity

status: Auto
OpenAlex: A5044077084
method: orcid
confidence: 1.00
cross-check: 68/76 CV titles in 127 works
Scholar: Found PjACD04AAAAJ
open reviews: 11

Cohort

cohort: Yale Chemistry

Metrics

h-index (Scholar): 34
citations (Scholar): 5270

Answers

PhD year: 2014 line 8
PhD institution: University of Virginia line 8
Current position: Associate Professor with tenure line 24

Latest run

run: Run 18
CV: stacy_malaker.pdf
stage: merge
status: Done

1–5 other other
6–14 EDUCATION education
15–21 RESEARCH INTERESTS other
22–77 RESEARCH EXPERIENCE positions
78–332 YALE PUBLICATIONS publications1 uncovered
333–427 PUBLICATIONS PRIOR TO YALE publications
428–462 PREPRINTS AND MANUSCRIPTS UNDER REVIEW publications
463–491 PATENTS publications
492–529 HONORS AND AWARDS awards
530–622 RESEARCH SUPPORT grants
623–1061 ORAL PRESENTATIONS presentations
1062–1165 POSTER PRESENTATIONS presentations
1166–1432 SELECTED MENTORSHIP, SERVICE, AND DIVERSITY OUTREACH service
1433–1487 TEACHING EXPERIENCE teaching
1488–1602 CURRENT AND FORMER TRAINEES teaching
1603–1631 REVIEWING ACTIVITY service
1632–1648 PROFESSIONAL AFFILIATIONS AND COURSEWORK other

CVs

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