Academic
Erik Thiede
Chemistry · 0000-0002-5666-1372
Citations received by year
Google Scholar profile
Citations received in each calendar year across this verified Scholar profile. Bars are annual counts; missing years are unknown. 2026 is an incomplete calendar year.
Publications
29 rows, 29 from the Scholar profile only
2026 Benchmarking Nanoscale Electrochemistry in Operando Transmission Electron Microscopy with a Standard Reference Electrode Nano Letters
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Benchmarking Nanoscale Electrochemistry in Operando Transmission Electron Microscopy with a Standard Reference Electrode | ||
| year scholar | 2026 | ||
| venue scholar | Nano Letters | ||
| kind scholar | other | ||
| first author scholar | Zhang |
Citations
- OpenAlex
- none
- Scholar
- 3
Match decisions
No decision recorded; a single record.
2026 Counting particles in cryo-electron microscopy may result in incorrect population estimates Communications Biology
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Counting particles in cryo-electron microscopy may result in incorrect population estimates | ||
| year scholar | 2026 | ||
| venue scholar | Communications Biology | ||
| kind scholar | other | ||
| first author scholar | Evans |
Citations
- OpenAlex
- none
- Scholar
- 6
Match decisions
No decision recorded; a single record.
2026 Cryo-Electron Microscopy Structural Ensemble Optimization Using Individual Particles Journal of Chemical Theory and Computation
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Cryo-Electron Microscopy Structural Ensemble Optimization Using Individual Particles | ||
| year scholar | 2026 | ||
| venue scholar | Journal of Chemical Theory and Computation | ||
| kind scholar | other | ||
| first author scholar | Silva-Sánchez |
Citations
- OpenAlex
- none
- Scholar
- 4
Match decisions
No decision recorded; a single record.
2026 CryoJAX: a cryo-electron microscopy image-simulation library in JAX Biological Crystallography
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | CryoJAX: a cryo-electron microscopy image-simulation library in JAX | ||
| year scholar | 2026 | ||
| venue scholar | Biological Crystallography | ||
| kind scholar | other | ||
| first author scholar | O'Brien |
Citations
- OpenAlex
- none
- Scholar
- 8
Match decisions
No decision recorded; a single record.
2026 Multi-Peptide Prompting Enables In-Context Learning in Protein Language bioRxiv, 2026.08
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Multi-Peptide Prompting Enables In-Context Learning in Protein Language | ||
| year scholar | 2026 | ||
| venue scholar | bioRxiv | ||
| kind scholar | other | ||
| first author scholar | Almonte |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
2026 Tracking Nanoscale Recrystallization Pathways in Amorphous GaAs Using 4D-STEM and Latent Space Analysis Microscopy and Microanalysis 32 (Supplement_1), ozag053
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Tracking Nanoscale Recrystallization Pathways in Amorphous GaAs Using 4D-STEM and Latent Space Analysis | ||
| year scholar | 2026 | ||
| venue scholar | Microscopy and Microanalysis | ||
| kind scholar | other | ||
| first author scholar | Kennedy |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
2025 Counting particles could give wrong probabilities in Cryo-Electron Microscopy bioRxiv, 2025.03
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Counting particles could give wrong probabilities in Cryo-Electron Microscopy | ||
| year scholar | 2025 | ||
| venue scholar | bioRxiv | ||
| kind scholar | other | ||
| first author scholar | Evans |
Citations
- OpenAlex
- none
- Scholar
- 5
Match decisions
No decision recorded; a single record.
2025 Cryo-electron microscopy ensemble optimization using individual particles and physical constraints bioRxiv, 2025.12
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Cryo-electron microscopy ensemble optimization using individual particles and physical constraints | ||
| year scholar | 2025 | ||
| venue scholar | bioRxiv | ||
| kind scholar | other | ||
| first author scholar | Silva-Sánchez |
Citations
- OpenAlex
- none
- Scholar
- 1
Match decisions
No decision recorded; a single record.
2025 Dynamic Evolution from Single-Atom Catalysts to Active Nanograins for CO2 Reduction Journal of the American Chemical Society
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar | CrossRef |
|---|---|---|---|---|
| title cv | Dynamic Evolution from Single-Atom Catalysts to Active Nanograins for CO2 Reduction | |||
| year cv | 2025 | |||
| venue crossref | Journal of the American Chemical Society | |||
| kind cv | article | |||
| DOI crossref | 10.1021/jacs.5c14123 | |||
| first author cv | Choi |
Citations
- OpenAlex
- none
- Scholar
- 29
- DOI
- 10.1021/jacs.5c14123
Match decisions
No decision recorded; a single record.
2025 Error Breakdown and Sensitivity Analysis of Dynamical Quantities in Markov State Models Journal of Chemical Theory and Computation
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Error Breakdown and Sensitivity Analysis of Dynamical Quantities in Markov State Models | ||
| year scholar | 2025 | ||
| venue scholar | Journal of Chemical Theory and Computation | ||
| kind scholar | other | ||
| first author scholar | Tuchkov |
Citations
- OpenAlex
- none
- Scholar
- 3
Match decisions
No decision recorded; a single record.
2025 InstaMap: instant-NGP for cryo-EM density maps Biological Crystallography
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | InstaMap: instant-NGP for cryo-EM density maps | ||
| year scholar | 2025 | ||
| venue scholar | Biological Crystallography | ||
| kind scholar | other | ||
| first author scholar | Woollard |
Citations
- OpenAlex
- none
- Scholar
- 8
Match decisions
No decision recorded; a single record.
2025 Operando Heating and Cooling Electrochemical 4D-STEM Probing Nanoscale Dynamics at Solid–Liquid Interfaces Journal of the American Chemical Society (Cover Story)
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Operando Heating and Cooling Electrochemical 4D-STEM Probing Nanoscale Dynamics at Solid–Liquid InterfacesOperando Heating and Cooling Electrochemical 4D-STEM Probing Nanoscale Dynamics at Solid–Liquid Interfaces | ||
| year scholar | 20252025 | ||
| venue scholar | Journal of the American Chemical Society (Cover Story)Journal of the American Chemical Society | ||
| kind scholar | otherother | ||
| first author scholar | KimKim |
Citations
- OpenAlex
- none
- Scholar
- 22
Match decisions
No decision recorded; a single record.
2024 Protein dynamics underlying allosteric regulation Current Opinion in Structural Biology
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Protein dynamics underlying allosteric regulation | ||
| year scholar | 2024 | ||
| venue scholar | Current Opinion in Structural Biology | ||
| kind scholar | other | ||
| first author scholar | Astore |
Citations
- OpenAlex
- none
- Scholar
- 70
Match decisions
No decision recorded; a single record.
2024 Unifying O (3) equivariant neural networks design with tensor-network formalism Machine Learning: Science and Technology
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Unifying O (3) equivariant neural networks design with tensor-network formalism | ||
| year scholar | 2024 | ||
| venue scholar | Machine Learning: Science and Technology | ||
| kind scholar | other | ||
| first author scholar | Li |
Citations
- OpenAlex
- none
- Scholar
- 6
Match decisions
No decision recorded; a single record.
2023 Conformational heterogeneity and probability distributions from single-particle cryo-electron microscopy Current Opinion in Structural Biology
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Conformational heterogeneity and probability distributions from single-particle cryo-electron microscopy | ||
| year scholar | 2023 | ||
| venue scholar | Current Opinion in Structural Biology | ||
| kind scholar | other | ||
| first author scholar | Tang |
Citations
- OpenAlex
- none
- Scholar
- 74
Match decisions
No decision recorded; a single record.
2023 Ensemble reweighting using cryo-EM particle images The Journal of Physical Chemistry B
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Ensemble reweighting using cryo-EM particle images | ||
| year scholar | 2023 | ||
| venue scholar | The Journal of Physical Chemistry B | ||
| kind scholar | other | ||
| first author scholar | Tang |
Citations
- OpenAlex
- none
- Scholar
- 52
Match decisions
No decision recorded; a single record.
2023 Positional encodings as group representations: A unified framework
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Positional encodings as group representations: A unified framework | ||
| year scholar | 2023 | ||
| kind scholar | other | ||
| first author scholar | Lim |
Citations
- OpenAlex
- none
- Scholar
- 2
Match decisions
No decision recorded; a single record.
2023 Understanding the sources of error in MBAR through asymptotic analysis The Journal of Chemical Physics
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Understanding the sources of error in MBAR through asymptotic analysis | ||
| year scholar | 2023 | ||
| venue scholar | The Journal of Chemical Physics | ||
| kind scholar | other | ||
| first author scholar | Li |
Citations
- OpenAlex
- none
- Scholar
- 5
Match decisions
No decision recorded; a single record.
2022 Graph neural networks for biochemistry that incorporate substructure Biophysical Journal
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Graph neural networks for biochemistry that incorporate substructure | ||
| year scholar | 2022 | ||
| venue scholar | Biophysical Journal | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 7
Match decisions
No decision recorded; a single record.
2021 A community-powered search of machine learning strategy space to find NMR property prediction models Plos one
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | A community-powered search of machine learning strategy space to find NMR property prediction models | ||
| year scholar | 2021 | ||
| venue scholar | Plos one | ||
| kind scholar | other | ||
| first author scholar | Bratholm |
Citations
- OpenAlex
- none
- Scholar
- 26
Match decisions
No decision recorded; a single record.
2021 Autobahn: Automorphism-based graph neural nets Advances in Neural Information Processing Systems
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Autobahn: Automorphism-based graph neural nets | ||
| year scholar | 2021 | ||
| venue scholar | Advances in Neural Information Processing Systems | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 75
Match decisions
No decision recorded; a single record.
2021 Error bounds for dynamical spectral estimation SIAM journal on mathematics of data science
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Error bounds for dynamical spectral estimation | ||
| year scholar | 2021 | ||
| venue scholar | SIAM journal on mathematics of data science | ||
| kind scholar | other | ||
| first author scholar | Webber |
Citations
- OpenAlex
- none
- Scholar
- 13
Match decisions
No decision recorded; a single record.
2020 Insulin dissociates by diverse mechanisms of coupled unfolding and unbinding The journal of physical chemistry. B
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Insulin dissociates by diverse mechanisms of coupled unfolding and unbinding | ||
| year scholar | 2020 | ||
| venue scholar | The journal of physical chemistry. B | ||
| kind scholar | other | ||
| first author scholar | Antoszewski |
Citations
- OpenAlex
- none
- Scholar
- 40
Match decisions
No decision recorded; a single record.
2020 Integrated variational approach to conformational dynamics: A robust strategy for identifying eigenfunctions of dynamical operators The Journal of Physical Chemistry B
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Integrated variational approach to conformational dynamics: A robust strategy for identifying eigenfunctions of dynamical operators | ||
| year scholar | 2020 | ||
| venue scholar | The Journal of Physical Chemistry B | ||
| kind scholar | other | ||
| first author scholar | Lorpaiboon |
Citations
- OpenAlex
- none
- Scholar
- 32
Match decisions
No decision recorded; a single record.
2019 Galerkin approximation of dynamical quantities using trajectory data The Journal of Chemical Physics
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Galerkin approximation of dynamical quantities using trajectory data | ||
| year scholar | 2019 | ||
| venue scholar | The Journal of Chemical Physics | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 107
Match decisions
No decision recorded; a single record.
2019 Molecular Dynamics Simulations of the Circadian Clock Protein Kaic Reveal Structural Insights into the Nucleotide Release and Circadian Timing Mechanisms Biophysical Journal
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Molecular Dynamics Simulations of the Circadian Clock Protein Kaic Reveal Structural Insights into the Nucleotide Release and Circadian Timing Mechanisms | ||
| year scholar | 2019 | ||
| venue scholar | Biophysical Journal | ||
| kind scholar | other | ||
| first author scholar | Hong |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
2018 Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights Proceedings of the National Academy of Sciences
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Molecular dynamics simulations of nucleotide release from the circadian clock protein KaiC reveal atomic-resolution functional insights | ||
| year scholar | 2018 | ||
| venue scholar | Proceedings of the National Academy of Sciences | ||
| kind scholar | other | ||
| first author scholar | Hong |
Citations
- OpenAlex
- none
- Scholar
- 41
Match decisions
No decision recorded; a single record.
2016 Eigenvector method for umbrella sampling enables error analysis The Journal of Chemical Physics
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Eigenvector method for umbrella sampling enables error analysis | ||
| year scholar | 2016 | ||
| venue scholar | The Journal of Chemical Physics | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 59
Match decisions
No decision recorded; a single record.
2015 Sharp entrywise perturbation bounds for Markov chains SIAM Journal on Matrix Analysis and Applications
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Sharp entrywise perturbation bounds for Markov chains | ||
| year scholar | 2015 | ||
| venue scholar | SIAM Journal on Matrix Analysis and Applications | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 25
Match decisions
No decision recorded; a single record.
In progress
8 items in progress, under review, forthcoming or a working paper · not counted as publications
2026 A Transformer-based Model for Rapid Microstructure Inference from Four-Dimensional Scanning Transmission Electron Microscopy Data arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | A Transformer-based Model for Rapid Microstructure Inference from Four-Dimensional Scanning Transmission Electron Microscopy Data | ||
| year scholar | 2026 | ||
| venue scholar | arXiv preprint arXiv:2602.12420 | ||
| kind scholar | other | ||
| first author scholar | Je |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
2026 Mapping recrystallization trajectories in GaAs using latent space diffraction analysis arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Mapping recrystallization trajectories in GaAs using latent space diffraction analysis | ||
| year scholar | 2026 | ||
| venue scholar | arXiv preprint arXiv:2607.13779 | ||
| kind scholar | other | ||
| first author scholar | Kennedy |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
2025 Cryo-EM as a Stochastic Inverse Problem arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Cryo-EM as a Stochastic Inverse Problem | ||
| year scholar | 2025 | ||
| venue scholar | arXiv preprint arXiv:2509.05541 | ||
| kind scholar | other | ||
| first author scholar | Espinosa |
Citations
- OpenAlex
- none
- Scholar
- 2
Match decisions
No decision recorded; a single record.
2022 Ensemble reweighting using Cryo-EM particles arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Ensemble reweighting using Cryo-EM particles | ||
| year scholar | 2022 | ||
| venue scholar | arXiv preprint arXiv:2212.05320 | ||
| kind scholar | other | ||
| first author scholar | Tang |
Citations
- OpenAlex
- none
- Scholar
- 3
Match decisions
No decision recorded; a single record.
2022 Group-equivariant neural networks with fusion diagrams arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Group-equivariant neural networks with fusion diagrams | ||
| year scholar | 2022 | ||
| venue scholar | arXiv preprint arXiv:2211.07482 | ||
| kind scholar | other | ||
| first author scholar | Li |
Citations
- OpenAlex
- none
- Scholar
- 5
Match decisions
No decision recorded; a single record.
2021 A Bayesian approach to extracting free-energy profiles from cryo-electron microscopy experiments arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | A Bayesian approach to extracting free-energy profiles from cryo-electron microscopy experiments | ||
| year scholar | 2021 | ||
| venue scholar | arXiv preprint arXiv:2102.02077 | ||
| kind scholar | other | ||
| first author scholar | Giraldo-Barreto |
Citations
- OpenAlex
- none
- Scholar
- 66
Match decisions
No decision recorded; a single record.
2020 The general theory of permutation equivarant neural networks and higher order graph variational encoders arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | The general theory of permutation equivarant neural networks and higher order graph variational encoders | ||
| year scholar | 2020 | ||
| venue scholar | arXiv preprint arXiv:2004.03990 | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- 47
Match decisions
No decision recorded; a single record.
2017 Stratification as a general variance reduction method for Markov chain Monte Carlo arXiv preprint
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Stratification as a general variance reduction method for Markov chain Monte Carlo | ||
| year scholar | 2017 | ||
| venue scholar | arXiv preprint arXiv:1705.08445 | ||
| kind scholar | other | ||
| first author scholar | Dinner |
Citations
- OpenAlex
- none
- Scholar
- 34
Match decisions
No decision recorded; a single record.
Not counted
2 items · dissertations, talks, media, datasets · listed, not counted as publications
2019 Towards the Accurate Estimation of Rare Events in Molecular Dynamics The University of Chicago
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Towards the Accurate Estimation of Rare Events in Molecular Dynamics | ||
| year scholar | 2019 | ||
| venue scholar | The University of Chicago | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
Advanced Methods in Markov chain Monte Carlo
CV span
Not in the CV.
Fields by source
| Field | CV | OpenAlex | Scholar |
|---|---|---|---|
| title scholar | Advanced Methods in Markov chain Monte Carlo | ||
| kind scholar | other | ||
| first author scholar | Thiede |
Citations
- OpenAlex
- none
- Scholar
- none
Match decisions
No decision recorded; a single record.
Positions
0 from the CV
No positions yet.
Entries needing review
0
Nothing to review.
Entries dropped by a reviewer
0
No dropped entries.