Publications

206 rows, counting the CV or the Scholar profile
Export

Core

Profile fields

Catalogue

2025 A platform for multimodal in vivo pooled genetic screens reveals regulators of liver function Xiaowei Zhuang · Cell 13 2025 Cell-type-specific 3D-genome organization and transcription regulation in the brain Xiaowei Zhuang · Science Advances 33 2025 High-resolution spatial mapping of cell state and lineage dynamics in vivo with PEtracer Xiaowei Zhuang · Science · Scholar only 49 2025 Perturb-Multimodal: A platform for pooled genetic screens with imaging and sequencing in intact mammalian tissue Xiaowei Zhuang · Cell · Scholar only 77 2025 The membrane skeleton is constitutively remodeled in neurons by calcium signaling Xiaowei Zhuang · Science 19 2024 A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features Xiaowei Zhuang · Nature Medicine 133 2024 The commitment of the human cell atlas to humanity Xiaowei Zhuang · Nature Communications 22 2023 A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain Xiaowei Zhuang · Nature 1,398 2023 Molecular and spatial signatures of mouse brain aging at single cell resolution Xiaowei Zhuang · Cell 457 2023 Molecularly defined and spatially resolved cell atlas of the whole mouse brain Xiaowei Zhuang · Nature 561 2023 Three-dimensional single-cell transcriptome imaging of thick tissues Xiaowei Zhuang · eLife · needs review 73 2022 Amplification methods and systems for merfish and other applications Xiaowei Zhuang · US Patent App · Scholar only 21 2022 A Preoptic neuronal population controls fever and appetite during sickness Xiaowei Zhuang · Nature 192 2022 Conservation and divergence of cortical cell organization in human and mouse revealed by MERFISH Xiaowei Zhuang · Science 317 2022 High-content CRISPR screening Xiaowei Zhuang · Nature Reviews Methods Primers · Scholar only 927 2022 Proteomic and functional analyses of the periodic membrane skeleton in neurons Xiaowei Zhuang · Nature Communications 69 2022 Spatially resolved epigenomic profiling of single cells in complex tissues Xiaowei Zhuang · Cell · needs review 242 2022 Three-dimensional interrogation of cell types and instinctive behavior in the periaqueductal gray Xiaowei Zhuang · BioRxiv, 2022.06 36 2021 A multimodal cell census and atlas of the mammalian primary motor cortex Xiaowei Zhuang · Nature 22 2021 Characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular densities Xiaowei Zhuang · Genome Research 203 2021 CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains Xiaowei Zhuang · Nature Genetics 211 2021 Decoding molecular and cellular heterogeneity of mouse nucleus accumbens Xiaowei Zhuang · Nature Neuroscience 227 2021 Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram Xiaowei Zhuang · Nature Methods 1,078 2021 Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma Xiaowei Zhuang · Cancer Cell 661 2021 Spatially resolved cell atlas of the mouse primary motor cortex by MERFISH Xiaowei Zhuang · Nature 588 2021 Spatially resolved single-cell genomics and transcriptomics by imaging Xiaowei Zhuang · Nature Methods 262 2021 Systems and methods for determining nucleic acids Xiaowei Zhuang · US Patent 11,098 · Scholar only 203 2021 Tetra-gel enables superior accuracy in combined super-resolution imaging and expansion microscopy Xiaowei Zhuang · Scientific Reports 36 2020 Genome-scale imaging of the 3D organization and transcriptional activity of chromatin Xiaowei Zhuang · Cell 621 2020 Lamina-Dependent Stretching and Unconventional Chromosome Compartments in Early C. elegans Embryos Xiaowei Zhuang · Molecular Cell 80 2020 m6A-binding YTHDF proteins promote stress granule formation Xiaowei Zhuang · Nature Chemical Biology 392 2020 Molecular, spatial and projection diversity of neurons in primary motor cortex revealed by in situ single-cell transcriptomics Xiaowei Zhuang · BioRxiv, 2020.06 · Scholar only 44 2020 Spatial organization of the transcriptome in individual neurons Xiaowei Zhuang · BioRxiv, 2020.12 41 2020 The human tumor atlas network: charting tumor transitions across space and time at single-cell resolution Xiaowei Zhuang · Cell · Scholar only 670 2019 Clonal decomposition and DNA replication states defined by scaled single-cell genome sequencing Xiaowei Zhuang · Cell 179 (5), 1207-1221. e22 · Scholar only 316 2019 Direct observation of coordinated DNA movements on the nucleosome during chromatin remodeling Xiaowei Zhuang · Nature Communications 106 2019 Imaging-based pooled CRISPR screening reveals regulators of lncRNA localization Xiaowei Zhuang · Proceedings of the National Academy of Sciences 150 2019 Matrix imprinting and clearing Xiaowei Zhuang · US Patent App · Scholar only 60 2019 Membrane-associated periodic skeleton is a signaling platform for RTK transactivation in neurons Xiaowei Zhuang · Science 152 2019 Multiplexed detection of RNA using MERFISH and branched DNA amplification Xiaowei Zhuang · Scientific Reports 221 2019 Multiplexed imaging using merfish, expansion microscopy, and related technologies Xiaowei Zhuang · US Patent App · Scholar only 62 2019 Probe library construction Xiaowei Zhuang · US Patent 10,240 · Scholar only 18 2019 Rotation tracking of genome-processing enzymes using DNA origami rotors Xiaowei Zhuang · Nature 147 2019 Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression Xiaowei Zhuang · Proceedings of the National Academy of Sciences 894 2019 Structural maturation of cortical perineuronal nets and their perforating synapses revealed by super-resolution imaging Xiaowei Zhuang · Proceedings of the National Academy of Sciences 161 2019 Structural plasticity of actin-spectrin membrane skeleton and functional role of actin and spectrin in axon degeneration Xiaowei Zhuang · eLife 73 2019 Synaptic Neurexin-1 Assembles into Dynamically Regulated Active Zone Nanoclusters Xiaowei Zhuang · Journal of Cell Biology 136 2019 βII-spectrin promotes mouse brain connectivity through stabilizing axonal plasma membranes and enabling axonal organelle transport Xiaowei Zhuang · Proceedings of the National Academy of Sciences 74 2018 Microtubule-directed transport of purine metabolons drives their cytosolic transit to mitochondria Xiaowei Zhuang · Proceedings of the National Academy of Sciences 97 2018 Molecular, Spatial and Functional Single- Cell Profiling of the Hypothalamic Preoptic Region Xiaowei Zhuang · Science 1,543
Back to the list

2025 · article · repository

A platform for multimodal in vivo pooled genetic screens reveals regulators of liver function

Cell · Xiaowei Zhuang

in CV in OpenAlex
noneScholar citations
13OpenAlex citations

From the CV

lines 210–212 · published

1. R. A. Saunders, W. E. Allen, X. Pan, J. Sandhu, J. Lu, T. K. Lau, K. Smolyar, Z. A. Sullivan, C.Dulac, J. S. Weissman, X. Zhuang. A platform for multimodal in vivo pooled genetic screensreveals regulators of liver function. Cell 188, 4790–4809 (2025).

Peer reviewed
yes
First author
Saunders
Co-authors
R. A. Saunders; W. E. Allen; X. Pan; J. Sandhu; J. Lu; T. K. Lau; K. Smolyar; Z. A. Sullivan; C. Dulac; J. S. Weissman; X. Zhuang
Subfield
other
Method
none
Invited
none
Publisher
none
Reprint or translation
none
DOI
10.1101/2024.11.18.624217
OpenAlex
W4404583601

Where each field came from

FieldCVOpenAlexScholar
title A platform for multimodal in vivo pooled genetic screens reveals regulators of liver function (used)A platform for multimodal in vivo pooled genetic screens reveals regulators of liver function
year 2025 (used)2024
venue Cell (used)bioRxiv (Cold Spring Harbor Laboratory)
kind article (used)working_paper
DOI 10.1101/2024.11.18.624217 (used)
preprint DOI 10.1101/2024.11.18.624217
first author Saunders (used)Saunders

The value in bold is the one the record uses.

How the records were joined

  • preprint merged · 1.00 · Run 18