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2025 A balancing act: Thymine DNA glycosylase combines sequence and rotational preferences to define lesion excision in the nucleosome core particle Sarah Delaney · Biochemistry 3 2025 Comparative studies on bulky DNA damage binding by nucleotide excision repair proteins using surface plasmon resonance, differential scanning fluorometry, and DNase I footprinting Sarah Delaney · Chemical Research in Toxicology 0 2025 Initiation of base excision repair is modulated by nucleosome occupancy modifying sequences Sarah Delaney · DNA Repair 2 2024 3,N4-etheno-5-methylcytosine blocks TET1-3 oxidation but is repaired by ALKBH2, 3 and FTO Sarah Delaney · Nucleic Acids Research 9 2024 Global screening of base excision repair in nucleosome core particles Sarah Delaney · DNA Repair 14 2023 A Half Century of Exploring DNA Excision Repair in Chromatin Sarah Delaney · Journal of Biological Chemistry 21 2023 Ionic strength modulates excision of uracil by SMUG1 from nucleosome core particles Sarah Delaney · DNA Repair 4 2022 Histone variants H3.3 and H2A.Z/H3.3 facilitate excision of uracil from nucleosome core particles Sarah Delaney · DNA Repair 18 2022 Kinetic Analysis of the Effect of N-terminal Acetylation in Thymine DNA Glycosylase Sarah Delaney · Biochemistry 2 2022 Obstacles and Opportunities for Base Excision Repair in Chromatin Sarah Delaney · DNA Repair 16 2022 The domino effect: Nucleosome dynamics and the regulation of base excision repair enzymes Sarah Delaney · DNA 5 2021 Nucleosome core particles lacking H2B or H3 tails are altered structurally and have differential base excision repair fingerprints Sarah Delaney · Biochemistry 9 2020 1,N6-ethenoadenine: From molecular to biological consequences Sarah Delaney · Chemical Research in Toxicology 8 2020 Comparison of the base excision and direct reversal repair pathways for correcting 1,N6-ethenoadenine in strongly positioned nucleosome core particles Sarah Delaney · Chemical Research in Toxicology 14 2019 Challenges for base excision repair enzymes: Acquiring access to damaged DNA in chromatin Sarah Delaney · The Enzymes 18 2019 Chromatin and other obstacles to base excision repair: potential roles in carcinogenesis Sarah Delaney · Mutagenesis · needs review 18 2019 Global Repair Profile of Human Alkyladenine DNA Glycosylase on Nucleosomes Reveals DNA Packaging Effects Sarah Delaney · ACS Chemical Biology · needs review 28 2019 Histone H2A variants facilitate DNA repair in chromatin Sarah Delaney · ACS Chemical Biology 26 2018 Human oxoguanine glycosylase 1 removes solution accessible 8-oxo-7,8-dihydroguanine lesions from globally substituted nucleosomes except in the dyad region Sarah Delaney · Biochemistry 44 2018 Initiation of base excision repair in chromatin Sarah Delaney · DNA Repair 21 2018 Nucleosomes and the three glycosylases: High, medium, and low levels of excision by the uracil DNA glycosylase superfamily Sarah Delaney · DNA Repair 46 2017 Differential ability of five DNA glycosylases to recognize and repair damage on nucleosomal DNA Sarah Delaney · ACS Chemical Biology 67 2017 Human OGG1 activity in nucleosomes is facilitated by transient unwrapping of DNA and is influenced by the local histone environment Sarah Delaney · DNA Repair 48 2016 Unique biophysical properties of repetitive DNA Sarah Delaney · The Journal of Physical Chemistry B 18 2015 Klenow fragment discriminates against the incorporation of the hyperoxidized dGTP lesion spiroiminodihydantoin into DNA Sarah Delaney · Chemical Research in Toxicology 8 2015 Rate-determining step of flap endonuclease 1 (FEN1) reflects a kinetic bias against long flaps and trinucleotide repeat sequences Sarah Delaney · Journal of Biological Chemistry 14 2014 A Chemical and kinetic perspective of base excision repair of DNA Sarah Delaney · Accounts of Chemical Research 112 2013 AGG/CCT interruptions affect nucleosome formation and positioning of healthy-length CGG/CCG triplet repeats Sarah Delaney · BMC Biochemistry 25 2013 Transient-state kinetics of apurinic/apyrimidinic (AP) endonuclease 1 acting on an authentic AP site and commonly-used substrate analogs: The effect of diverse metal ions and base mismatches Sarah Delaney · Biochemistry 53 2012 CAG/CTG repeats alter affinity for the histone core and positioning of DNA in the nucleosome Sarah Delaney · Biochemistry 27 2012 Chemical and biological consequences of oxidatively damaged guanine in DNA Sarah Delaney · Free Radical Research 98 2012 Thermodynamic consequences of the hyperoxidized guanine lesion guanidinohydantoin in duplex DNA Sarah Delaney · Chemical Research in Toxicology 12 2012 Trinucleotide repeat DNA alters structure to minimize the thermodynamic impact of 8-oxo-7,8-dihydroguanine Sarah Delaney · Biochemistry 28 2011 A small unstructured nucleic acid disrupts a trinucleotide repeat hairpin Sarah Delaney · Biochemical and Biophysical Research Communications 6 2011 Development of a DNA- damaging ferrocene amino acid Sarah Delaney · Journal of Organometallic Chemistry 11 2011 Incidence and persistence of 8- oxo-7,8-dihydroguanine within a hairpin intermediate exacerbates a toxic oxidation cycle associated with trinucleotide repeat expansion Sarah Delaney · DNA Repair 47 2011 Premutation huntingtin allele adopts a non-B conformation and contains a hot spot for DNA damage Sarah Delaney · Biochemical and Biophysical Research Communications 2 2011 Structure of even/odd trinucleotide repeat sequences modulates persistence of non-B conformations and conversion to duplex Sarah Delaney · Biochemistry 32 2010 AGG Interruptions in (CGG)n DNA repeat tracts modulate the structure and thermodynamics of non-B conformations in vitro Sarah Delaney · Biochemistry 41 2010 Mechanistic studies of hairpin to duplex conversion for trinucleotide repeat sequences Sarah Delaney · Journal of Biological Chemistry 20 2009 Structure-dependent DNA damage and repair in a trinucleotide repeat sequence Sarah Delaney · Biochemistry 72 2007 Chemical-biological fingerprinting: Probing the properties of DNA lesions formed by peroxynitrite Sarah Delaney · Chemical Research in Toxicology 30 2007 DNA polymerase V allows bypass of toxic guanine oxidation products in vivo Sarah Delaney · Journal of Biological Chemistry 66 2007 The substrate specificity of MutY for hyperoxidized guanine lesions in vivo Sarah Delaney · Biochemistry 51 2004 Charge equilibration between two distinct sites in double helical DNA Sarah Delaney · Proceedings of the National Academy of Sciences 40 2003 Charge transport in DNA duplex/quadruplex conjugates Sarah Delaney · Biochemistry 79 2003 Long-range DNA charge transport Sarah Delaney · The Journal of Organic Chemistry 225 2003 Rapid radical formation by DNA charge transport through sequences lacking intervening guanines Sarah Delaney · Journal of the American Chemical Society 42 2002 Oxidative damage by ruthenium complexes containing the dipyridophenazine ligand or its derivatives: A focus on intercalation Sarah Delaney · Inorganic Chemistry 237 2001 A platinum(IV) complex oxidizes guanine to 8-oxo-guanine in DNA and RNA Sarah Delaney · Inorganic Chemistry 35
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2025 · article · journal

A balancing act: Thymine DNA glycosylase combines sequence and rotational preferences to define lesion excision in the nucleosome core particle

Biochemistry · Sarah Delaney

in CV in OpenAlex
noneScholar citations
3OpenAlex citations

From the CV

lines 77–79 · published

51. *Ferrara, J.C. and Delaney, S. A balancing act: Thymine DNA glycosylase combines sequence and rotationalpreferences to define lesion excision in the nucleosome core particle. Biochemistry (2025) 64, 2068.DOI:10.1021/acs.biochem.5c00090

Peer reviewed
yes
First author
Ferrara
Co-authors
*Ferrara, J.C.; Delaney, S.
Subfield
other
Method
none
Invited
none
Publisher
none
Reprint or translation
none
DOI
10.1021/acs.biochem.5c00090
OpenAlex
W4409407176

Where each field came from

FieldCVOpenAlexScholar
title A balancing act: Thymine DNA glycosylase combines sequence and rotational preferences to define lesion excision in the nucleosome core particle (used)A Balancing Act: Thymine DNA Glycosylase Combines Sequence and Rotational Preferences To Define Lesion Excision in the Nucleosome Core Particle
year 2025 (used)2025
venue Biochemistry (used)Biochemistry
kind article (used)article
DOI 10.1021/acs.biochem.5c00090 (used)10.1021/acs.biochem.5c00090
first author FerraraFerrara (used)

The value in bold is the one the record uses.

How the records were joined

  • doi merged · 1.00 · Run 18