Trackademia

Welcome to Trackademia

The idea behind Trackademia is to build on existing academic databases like Google Scholar and OpenAlex so that you can trust the data and use it for whatever you want. That comes down to two things.

More data, and more ways to use it. We aggregate publication data from every major source into a single dataset and add information pulled from faculty CVs. Then we let you slice it however you want: choose which sources to build from, write your own formulas, weight journals, adjust for department size.

More accurate, and honest about where it isn’t. We focus on a smaller set of schools so we can verify everything carefully. Faculty lists come from department websites rather than being inferred from publication records, so we know who should be in the data before we go looking. When we can’t find data on someone, we record the gap instead of dropping them. Every number comes with a coverage rate you can check against ground truth.

Everything in Trackademia is built from seven units. AI merges duplicate records across sources and tags each publication so these categories hold up:

  • Publication — citation counts, authors, journal, peer review status, and more
  • Publication group — versions of the same work combined into one entity, such as a working paper and the article it became
  • Academic
  • Department
  • University
  • Field
  • Journal

There are two modes. In Database mode you browse the underlying records and filter by any of the seven units. In Analytics mode you get graphs and comparisons, and you switch views to compare two departments, compare one department against the average of the others, or see them all at once. Tabs let you focus on a particular level of the data.

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Journal

Biochemistry

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Citation weight

Tierunranked
Weight in force
Weightingoff

Weight inputs

Each figure with its percentile among the ranked journals. A is the median, over the academics with a work here, of that academic’s citations to the works this site counts for them - never a Google Scholar profile total. Over every academic of this field, all years, whatever the filters select.

A · academics’ median10,100.5 · 31%
B · citations per work94.4 · 44%
N · works252 · 91%
P · academics48 · 88%
Formula result0.638

From this institution

Under these filters. A work with no citation count is unknown here, never a zero.

Works251
Citations22,850 over 242 of 251 works
Citations per counted work94.4
Weighted citations
Academics48
Departments8
First seen1980

Works placed per year

251 of these 251 works carry a year; an undated work is in no year. Works placed, under these filters.

Departments publishing there 8

DepartmentWorks
Penn Chemistry61
Yale Chemistry43
Cornell Chemistry35
Dartmouth Chemistry31
Columbia Chemistry29
Princeton Chemistry27
Brown Chemistry17
Harvard Chemistry8

A work held by two departments counts once in each, so these add up to more than the works above.

Works placed there 251

YearTitleAcademicsCitations
2018P-bodies: composition, properties, and functionsSarah Slavoff796
1994Specific nucleus as the transition state for protein folding: evidence from the lattice modelEugene I. Shakhnovich645
1989Directed alteration of the D1 polypeptide of photosystem II: evidence that tyrosine-161 is the redox component, Z, connecting the oxygen-evolving complex to the primary …Gary Brudvig396
1996Identification of two functionally different classes of exocellulasesBruce Ganem392
1999Quantitative Analysis of Phospholipids in Functionally Important Membrane Domains from RBL-2H3 Mast Cells Using Tandem High-Resolution Mass SpectrometryBarbara A. Baird375
1988Cytochrome b-559 may function to protect photosystem II from photoinhibitionGary Brudvig351
2008Free energy landscape of enzyme catalysisSharon Hammes-Schiffer348
2011Flexibility, diversity, and cooperativity: Pillars of enzyme catalysisSharon Hammes-Schiffer329
1980Reactions of nitric oxide with cytochrome c oxidaseGary Brudvig301
2009Substrate-triggered formation and remarkable stability of the C–H bond-cleaving chloroferryl intermediate in the aliphatic halogenase, SyrB2.Megan L. Matthews300
2002Key determinants of receptor activation in the agr autoinducing peptides of Staphylococcus aureusTom Muir290
1992A model for the role of multiple cysteine residues involved in ribonucleotide reduction: amazing and still confusingSquire J. Booker285
2009α-Synuclein Binds Large Unilamellar Vesicles as an Extended Helix†Elizabeth Rhoades282
1991Molecular Dynamics Simulations of the Unfolding of an -Helical Analog of Ribonuclease-A S-Peptide in Water.William Jorgensen268
1995Dynamics of the flexible loop of triose-phosphate isomerase: the loop motion is not ligand gatedAnn E. McDermott257
1985Electron transfer in photosystem II at cryogenic temperaturesGary Brudvig257
2011S1-State Model of the O2-Evolving Complex of Photosystem IIGary Brudvig255
2008Structural Studies of Human Histone Deacetylase 8 and Its Site-Specific Variants Complexed with Substrate and Inhibitors,David W. Christianson251
2004Lipoyl synthase requires two equivalents of S-adenosyl-L-methionine to synthesize one equivalent of lipoic acidSquire J. Booker238
2004Structure of Human Epoxide Hydrolase Reveals Mechanistic Inferences on Bifunctional Catalysis in Epoxide and Phosphate Ester Hydrolysis,David W. Christianson238
1997Molecular Dynamics of the Unfolding of Barnase in Water and 8M Aqueous UreaWilliam Jorgensen229
2001Probing Erectile Function: S-(2-Boronoethyl)-l-Cysteine Binds to Arginase as a Transition State Analogue and Enhances Smooth Muscle Relaxation in Human Penile …David W. Christianson222
2004Redox functions of carotenoids in photosynthesisGary Brudvig218
2001Quantifying the Ion Selectivity of the Ca2+ Site in Photosystem II: Evidence for Direct Involvement of Ca2+ in O2 FormationGary Brudvig214
1992Photooxidation of cytochrome b559 in oxygen-evolving photosystem IIGary Brudvig204
2001Fluorescence Anisotropy Measurements of Lipid Order in Plasma Membranes and Lipid Rafts from RBL-2H3 Mast CellsBarbara A. Baird201
1995Is burst hydrophobic collapse necessary for protein folding?Eugene I. Shakhnovich201
2003Human Arginase II: Crystal Structure and Physiological Role in Male and Female Sexual Arousal,David W. Christianson193
2010Structure of epi-isozizaene synthase from Streptomyces coelicolor A3 (2), a platform for new terpenoid cyclization templatesDavid W. Christianson188
2002Impact of enzyme motion on activitySharon Hammes-Schiffer188
2004Escherichia coli Lipoyl Synthase Binds Two Distinct [4Fe−4S] Clusters per PolypeptideSquire J. Booker186
2011Structural/functional role of chloride in photosystem IIGary Brudvig183
2007X-ray crystal structure of aristolochene synthase from Aspergillus terreus and the evolution of templates for the cyclization of farnesyl diphosphateDavid W. Christianson178
2012Evidence for only oxygenative cleavage of aldehydes to alk (a/e) nes and formate by cyanobacterial aldehyde decarbonylasesSquire J. Booker171
2002The Novel Binding Mode of N-Alkyl-N‘-hydroxyguanidine to Neuronal Nitric Oxide Synthase Provides Mechanistic Insights into NO BiosynthesisMing Xian169
1987Comparison of the structure of the manganese complex in the S1 and S2 states of the photosynthetic oxygen-evolving complex: an x-ray absorption spectroscopy studyAnn E. McDermott169
2006Engineering Light-Gated Ion ChannelsDirk Trauner167
2021Genetic Code Expansion: A Brief History and PerspectiveVirginia W. Cornish165
1993Molecular Dynamics Simulations of the Unfolding of Apomyoglobin in Water.William Jorgensen164
1989Molecular basis of the heat denaturation of photosystem IIGary Brudvig164
2004Insight into the polar reactivity of the onium chalcogen analogues of S-adenosyl-L-methionineSquire J. Booker162
1994Coenzyme B12-dependent ribonucleotide reductase: evidence for the participation of five cysteine residues in ribonucleotide reductionSquire J. Booker156
1981Conformations of oxidized cytochrome c oxidaseGary Brudvig153
1998S-Adenosylmethionine-Dependent Reduction of Lysine 2,3-Aminomutase and Observation of the Catalytically Functional Iron−Sulfur Centers by Electron …Squire J. Booker149
1990Electron-transfer reactions in manganese-depleted photosystem IIGary Brudvig149
2001Characterization of carotenoid and chlorophyll photooxidation in photosystem IIGary Brudvig143
1983Structural studies on the membrane-bound immunoglobulin E-receptor complex. 1. Characterization of large plasma membrane vesicles from rat basophilic leukemia cells and insertion of amphipathic fluorescent probesBarbara A. Baird141
1996Reversal of the hydrogen bond to zinc ligand histidine-119 dramatically diminishes catalysis and enhances metal equilibration kinetics in carbonic anhydrase IIDavid W. Christianson139
2009Crystal structure of (+)-δ-cadinene synthase from Gossypium arboreum and evolutionary divergence of metal binding motifs for catalysisDavid W. Christianson139
1993Spectroscopic evidence from site-directed mutants of Synechocystis PCC6803 in favor of a close interaction between histidine 189 and redox-active tyrosine 160, both of …Gary Brudvig139
1990The S3 state of photosystem II: differences between the structure of the manganese complex in the S2 and S3 states determined by X-ray absorption spectroscopyAnn E. McDermott137
2008In vitro characterization of AtsB, a radical SAM formylglycine-generating enzyme that contains three [4Fe-4S] clustersSquire J. Booker137
1989Manganese and calcium requirements for reconstitution of oxygen-evolution activity in manganese-depleted photosystem II membranesGary Brudvig135
1997Histidine→ carboxamide ligand substitutions in the zinc binding site of carbonic anhydrase II alter metal coordination geometry but retain catalytic activityDavid W. Christianson134
1991An unusual peptide conformation may precipitate amyloid formation in Alzheimer's disease: application of solid-state NMR to the determination of protein secondary structureAnn E. McDermott132
2008Directing noble metal ion chemistry within a designed ferritin proteinDavid W. Christianson · Ivan J. Dmochowski132
1991Engineering the hydrophobic pocket of carbonic anhydrase IIDavid W. Christianson130
2013S0‑State Model of the Oxygen-Evolving Complex of Photosystem IIGary Brudvig130
1993New evidence for a membrane-bound pathway in hormone receptor bindingDale F. Mierke129
2000Direct FeS cluster involvement in generation of a radical in lysine 2, 3-aminomutaseSquire J. Booker128
1992Rotational resonance NMR study of the active site structure in bacteriorhodopsin: conformation of the Schiff base linkageAnn E. McDermott127
2015Moving protons and electrons in biomimetic systemsJames Mayer127
2004Oxygen activation by the noncoupled binuclear copper site in peptidylglycine α-hydroxylating monooxygenase. Spectroscopic definition of the resting sites and the putative CuIIM …Peng Chen124
2003Active site loop motion in triosephosphate isomerase: T-jump relaxation spectroscopy of thermal activationAnn E. McDermott123
2013Mutation of lysine 317 in the D2 subunit of photosystem II alters chloride binding and proton transportGary Brudvig123
2010Dihydropyrimidinone positive modulation of δ-subunit-containing γ-aminobutyric acid type A receptors, including an epilepsy-linked mutant variantBruce Ganem122
2013Catalytic efficiency of enzymes: A theoretical analysisSharon Hammes-Schiffer120
1990The S0 state of photosystem II induced by hydroxylamine: differences between the structure of the manganese complex in the S0 and S1 states determined by X-ray absorption …Ann E. McDermott117
2013α-Synuclein can inhibit SNARE-mediated vesicle fusion through direct interactions with lipid bilayersElizabeth Rhoades117
2002Crystal structure of F65A/Y131C-methylimidazole carbonic anhydrase V reveals architectural features of an engineered proton shuttleDavid W. Christianson116
1994Design and Chemical Synthesis of a Neo-Protein Structural Model for the Cytoplasmic Domain of a Multi-Subunit Cell-Surface Receptor: Integrin IIb3 (Platelet GP11b-IIIa).Tom Muir116
1991Conformations of IgE Bound to Its Receptor FcRI and in SolutionBarbara A. Baird115
2009Characterization of RimO, a new member of the methylthiotransferase subclass of the radical SAM superfamilySquire J. Booker114
1997Altering the binuclear manganese cluster of arginase diminishes thermostability and catalytic functionDavid W. Christianson114
1999Studies on the catalysis of carbon− cobalt bond homolysis by ribonucleoside triphosphate reductase: Evidence for concerted carbon− cobalt bond homolysis and thiyl radical formationSquire J. Booker112
2001Mechanistic and Metabolic Inferences from the Binding of Substrate Analogues and Products to Arginase,David W. Christianson111
1997An Experimental Approach to Evaluating the Role of Backbone Interactions in Proteins Using Unnatural Amino Acid MutagenesisVirginia W. Cornish109
2018Enhanced Solubilization of Class B Radical S‑Adenosylmethionine Methylases by Improved Cobalamin Uptake in Escherichia coliSquire J. Booker109
2002X-ray Crystal Structures of D100E Trichodiene Synthase and Its Pyrophosphate Complex Reveal the Basis for Terpene Product Diversity,David W. Christianson107
1990Rotational resonance determination of the structure of an enzyme-inhibitor complex: phosphorylation of an (aminoalkyl) phosphinate inhibitor of D-alanyl-D-alanine ligase by ATPAnn E. McDermott106
2010A Basic Sequence in STIM1 Promotes Ca2+ Influx by Interacting with the C-Terminal Acidic Coiled Coil of Orai1Barbara A. Baird106
1999Molecular complex of cholecystokinin-8 and N-terminus of the cholecystokinin A receptor by NMR spectroscopyDale F. Mierke105
1991Nitrogen ligation to manganese in the photosynthetic oxygen-evolving complex: continuous-wave and pulsed EPR studies of photosystem II particles containing nitrogen-14 or …Ann E. McDermott105
1988Characterization of the manganese oxygen-evolving complex and the iron-quinone acceptor complex in photosystem II from a thermophilic cyanobacterium by electron paramagnetic …Ann E. McDermott103
1999Deuterium magic angle spinning studies of substrates bound to cytochrome P450Ann E. McDermott103
2010Structures of metal-substituted human histone deacetylase 8 provide mechanistic inferences on biological functionDavid W. Christianson103
1991Conformational mobility of His-64 in the Thr-200. fwdarw. Ser mutant of human carbonic anhydrase IIDavid W. Christianson100
2010A consensus mechanism for radical SAM-dependent dehydrogenation? BtrN contains two [4Fe–4S] clustersSquire J. Booker95
2000Characterization of parathyroid hormone/receptor interactions: structure of the first extracellular loopDale F. Mierke94
2002Intermolecular Interactions between Cholecystokinin-8 and the Third Extracellular Loop of the Cholecystokinin-2 Receptor,Dale F. Mierke93
1994Determination of internuclear distances and the orientation of functional groups by solid-state NMR: rotational resonance study of the conformation of retinal in bacteriorhodopsinAnn E. McDermott92
2015Light-Dark Adaptation of Channelrhodopsin Involves Photoconversion Between the all-trans and 13-cis Retinal IsomersDirk Trauner90
1992Dynamic Conformations Compared for IgE and IgG1 in Solution and Bound to ReceptorsBarbara A. Baird89
1998Binding Domain of Human Parathyroid Hormone Receptor: From Conformation to Function,Dale F. Mierke88
2002Function of Extracellular Loop 2 in Bovine Rhodopsin: Glutamic Acid 181 Modulates Stability and Wavelength Maximal Absorption of Metarhodopsin IIE. Chui-Ying Yan86
1999Molecular characterization of the receptor− ligand complex for parathyroid hormoneDale F. Mierke85
1983Structural studies on the membrane-bound immunoglobulin E (IgE)-receptor complex. 2. Mapping of distances between sites on IgE and the membrane surfaceBarbara A. Baird84
2000Heterogeneous Glycosylation of Immunoglobulin E Constructs Characterized by Top-Down High-Resolution 2-D Mass SpectrometryBarbara A. Baird83
2011Biosynthetic chlorination of the piperazate residue in kutzneride biosynthesis by KthPFrank C. Schroeder82
2000Mapping the Bimolecular Interface of the Parathyroid Hormone (PTH)−PTH1 Receptor Complex: Spatial Proximity between Lys27 (of the Hormone Principal Binding Domain …Dale F. Mierke80
2000Lysine 2, 3-aminomutase and trans-4, 5-dehydrolysine: characterization of an allylic analogue of a substrate-based radical in the catalytic mechanismSquire J. Booker80
2003Charge transport in DNA duplex/quadruplex conjugatesSarah Delaney79
1990Solid-state carbon-13 NMR study of tyrosine protonation in dark-adapted bacteriorhodopsinAnn E. McDermott79
2004Isotope and elemental effects indicate a rate-limiting methyl transfer as the initial step in the reaction catalyzed by Escherichia coli cyclopropane fatty acid synthaseSquire J. Booker79
2013Further characterization of Cys-type and Ser-type anaerobic sulfatase maturating enzymes suggests a commonality in mechanism of catalysisSquire J. Booker77
2003Highly Effective Poly(Ethylene Glycol) Architectures for Specific Inhibition of Immune Receptor ActivationBarbara A. Baird74
2014Characterization of the lipid binding properties of Otoferlin reveals specific interactions between PI (4, 5) P2 and the C2C and C2F domainsE. James Petersson74
2009Structure-dependent DNA damage and repair in a trinucleotide repeat sequenceSarah Delaney72
2007Thermodynamics of Ni2+, Cu2+, and Zn2+ Binding to the Urease Metallochaperone UreEDean E. Wilcox72
2014Evidence for a catalytically and kinetically competent enzyme–substrate cross-linked intermediate in catalysis by lipoyl synthaseSquire J. Booker70
1994Deuterium solid-state nuclear magnetic resonance studies of methyl group dynamics in bacteriorhodopsin and retinal model compounds: evidence for a 6-s-trans chromophore in the …Ann E. McDermott69
1992Aggregation of IgE- Receptor Complexes on Rat Basophilic Leukemia Cells Does Not Change the Intrinsic Affinity but Can Alter the Kinetics of the Ligand-IgE InteractionBarbara A. Baird69
2012Conformational Change in Rhomboid Protease GlpG Induced by Inhibitor Binding to Its S′ SubsitesJon Ellman67
2010Quantitative Characterization of the Interactions among c-myc Transcriptional Regulators FUSE, FBP, and FIRElizabeth Rhoades66
2013Thio effects and an unconventional metal ion rescue in the genomic hepatitis delta virus ribozymeSharon Hammes-Schiffer66
1999Regulation of Phenylalanine Biosynthesis. Studies on the Mechanism of Phenylalanine Binding and Feedback Inhibition in the Escherichia coli P-ProteinBruce Ganem65
2015Inverse thio effects in the hepatitis delta virus ribozyme reveal that the reaction pathway is controlled by metal ion charge densitySharon Hammes-Schiffer65
2006Solution Structure and Folding Characteristics of the C-terminal SH3 Domain of c-Crk-II.Tom Muir63
2010Hydrophobic residues in helix 8 of cannabinoid receptor 1 are critical for structural and functional propertiesDale F. Mierke62
2000Probing the Catalytic Mechanism of Prephenate Dehydratase by Site-Directed Mutagenesis of the Escherichia coli P-Protein Dehydratase DomainBruce Ganem62
2011Molecular Investigations of the Structure and Function of the Protein Phosphatase 1: Spinophilin: Inhibitor-2 Heterotrimeric ComplexMichael J. Ragusa61
1997Evidence Supporting a Role for Microfilaments in Regulating the Coupling between Poorly Dissociable IgE-FcRI Aggregates and Downstream Signaling PathwaysBarbara A. Baird60
2006The mid-region of parathyroid hormone (1− 34) serves as a functional docking domain in receptor activationDale F. Mierke59
2000Cooperative Thermal Denaturation of Proteins Designed by Binary Patterning of Polar and Nonpolar Amino AcidsMichael Hecht59
2014BIN1 membrane curvature sensing and generation show autoinhibition regulated by downstream ligands and PI (4, 5) P2Tobias Baumgart58
2011Metal binding motif in the active site of the HDV ribozyme binds divalent and monovalent ionsSharon Hammes-Schiffer58
2004Semisynthesis of Phosphovariants of SMAD2 Reveals a Substrate Preference of the Activated TR1 Kinase.Tom Muir57
1990Conformational studies by circular dichroism, proton NMR, and computer simulations of bombolitins I and III in aqueous solution containing surfactant micellesDale F. Mierke56
2017Specificity and Speed: Tethered PhotopharmacologyDirk Trauner56
1991Mechanism of proton pumping in bacteriorhodopsin by solid-state NMR: the protonation state of tyrosine in the light-adapted and M statesAnn E. McDermott54
1985Structural Mapping of Membrane-Bound Immunoglobulin E-Receptor Complexes: Use of Monoclonal Anti-IgE Antibodies to Probe the Conformation of Receptor-Bound IgEBarbara A. Baird54
2011Mutations that replace aromatic side chains promote aggregation of the Alzheimer’s Ab peptideMichael Hecht54
2013Transient-state kinetics of apurinic/apyrimidinic (AP) endonuclease 1 acting on an authentic AP site and commonly-used substrate analogs: The effect of diverse metal ions and base mismatchesSarah Delaney53
1985Structural Mapping of Fc Receptor Bound Immunoglobulin E: Proximity to the Membrane Surface of the Antibody Combining Site and Another Site in the Fab SegmentsBarbara A. Baird53
2018Characterization of Natural Colibactin–Nucleobase Adducts by Tandem Mass Spectrometry and Isotopic Labeling. Support for DNA Alkylation by Cyclopropane Ring OpeningJason M. Crawford53
2015Efficient Delivery of Long-Chain Fatty Aldehydes from the Nostoc punctiforme Acyl–Acyl Carrier Protein Reductase to Its Cognate Aldehyde-Deformylating OxygenaseSquire J. Booker52
2020The NBDY microprotein regulates cellular RNA decappingSarah Slavoff52
2007The substrate specificity of MutY for hyperoxidized guanine lesions in vivoSarah Delaney51
2014Thermodynamics of Formation of the Insulin Hexamer: Metal-Stabilized Proton-Coupled Assembly of Quaternary StructureDean E. Wilcox51
2017Thermophilic Ferritin 24mer Assembly and Nanoparticle Encapsulation Modulated by Interdimer Electrostatic RepulsionIvan J. Dmochowski51
2007AurF from Streptomyces thioluteus and a possible new family of manganese/iron oxygenases.Megan L. Matthews51
2013Identification of the catalytic Mg2+ ion in the hepatitis delta virus ribozymeSharon Hammes-Schiffer51
2002Identification of the principal binding site for RGD-containing ligands in the αvβ3 integrin: a photoaffinity cross-linking studyDale F. Mierke50
1989EXAFS structural study of FX, the low-potential iron-sulfur center in photosystem IAnn E. McDermott49
2003Ionic states of substrates and transition state analogues at the catalytic sites of N-ribosyltransferasesAnn E. McDermott48
2008Characterization of quinolinate synthases from Escherichia coli, Mycobacterium tuberculosis, and Pyrococcus horikoshii indicates that [4Fe-4S] clusters are common cofactors …Squire J. Booker48
2010Hydrogen bonding in the active site of ketosteroid isomerase: Electronic inductive effects and hydrogen bond couplingSharon Hammes-Schiffer48
2002Structure of the third intracellular loop of the human cannabinoid 1 receptorDale F. Mierke47
2011Functional model of metabolite gating by human voltage-dependent anion channel 2Ann E. McDermott47
2009Hybrid quantum/classical molecular dynamics simulations of the proton transfer reactions catalyzed by ketosteroid isomerase: Analysis of hydrogen bonding, conformational motions, and electrostaticsSharon Hammes-Schiffer47
2004Resonance Raman Analysis of the Mechanism of Energy Storage and Chromophore Distortion in the Primary Visual PhotoproductE. Chui-Ying Yan47
2014Thermodynamic Contributions to the Stability of the Insulin HexamerDean E. Wilcox46
1987Structure of the manganese complex of photosystem II upon removal of the 33-kilodalton extrinsic protein: An X-ray absorption spectroscopy studyAnn E. McDermott45
2018Human oxoguanine glycosylase 1 removes solution accessible 8-oxo-7,8-dihydroguanine lesions from globally substituted nucleosomes except in the dyad regionSarah Delaney44
1994Stabilizing and Destabilizing Effects of Placing b-Branched Amino Acids in Protein a-HelicesVirginia W. Cornish44
1999Solid state NMR studies of hydrogen bonding in a citrate synthase inhibitor complexAnn E. McDermott44
2019Interrogation of Eukaryotic Stop Codon Readthrough Signals by In Vitro RNA SelectionVirginia W. Cornish43
2018Stereochemical and Mechanistic Investigation of the Reaction Catalyzed by Fom3 from Streptomyces fradiae, a Cobalamin-Dependent Radical S‑Adenosylmethionine MethylaseSquire J. Booker43
2010AGG Interruptions in (CGG)n DNA repeat tracts modulate the structure and thermodynamics of non-B conformations in vitroSarah Delaney41
2009GRK2 activation by receptors: role of the kinase large lobe and carboxyl terminal tailMichael J. Ragusa41
2018Characterization of 1,2-propanediol dehydratases reveals distinct mechanisms for B12-dependent and glycyl radical enzymes.Emily Balskus41
1993Mechanism for the Rotamase Activity of FK506 Binding Protein from Molecular Dynamics Simulations.William Jorgensen41
2009Morphology and secondary structure of stable β-oligomers formed by amyloid peptide PrP (106− 126)Patrick J. Walsh39
2004Toward parathyroid hormone minimization: Conformational studies of cyclic PTH (1− 14) analoguesDale F. Mierke38
2018Optochemical control of protein localization and activity within cell-like compartmentsDavid M. Chenoweth38
2017Site-Specific Fluorescence Polarization for Studying the Disaggregation of α‑Synuclein Fibrils by Small MoleculesE. James Petersson · Tobias Baumgart38
2001Photoaffinity labeling of mutant neurokinin-1 receptors reveals additional structural features of the substance P/NK-1 receptor complexDale F. Mierke37
1991Bivalent Ligand Dissociation Kinetics from Receptor-Bound Immunoglobulin E: Evidence for a Time-Dependent Increase in Ligand Rebinding at the Cell SurfaceBarbara A. Baird37
2008Mapping peptide hormone–receptor interactions using a disulfide-trapping approachDale F. Mierke36
1990A Nanosecond Fluorescence Depolarization Study on the Segmental Flexibility of Receptor-Bound Immunoglobulin EBarbara A. Baird36
2020Global profiling of cellular substrates of human Dcp2Sarah Slavoff36
1997Conformational Studies of Mono- and Bicyclic Parathyroid Hormone-Related Protein-Derived Agonists†Dale F. Mierke35
2004Correlation Between Ligand-Receptor Affinity and the Transcription Readout in a Yeast Three-Hybrid SystemVirginia W. Cornish35
1996The Fc Segment of IgE Influences the Kinetics of Dissociation of a Symmetrical Bivalent Ligand from Cyclic Dimeric ComplexesBarbara A. Baird35
1999H-Bonding Maintains the Active Site of Type I Copper Proteins: Site-Directed Mutagenesis of Asn38 in Poplar PlastocyaninMichael Hecht35
2015Fast helix formation in the B domain of protein A revealed by site-specific infrared probesCaitlin Davis35
2014WW domain folding complexity revealed by infrared spectroscopyCaitlin Davis35
1997Mono-and bicyclic analogs of parathyroid hormone-related protein. 2. Conformational analysis of antagonists by CD, NMR, and distance geometry calculationsDale F. Mierke33
1996Expression in yeast and purification of functional macrophage nitric oxide synthase. Evidence for cysteine-194 as iron proximal ligandSquire J. Booker33
2011Structure of even/odd trinucleotide repeat sequences modulates persistence of non-B conformations and conversion to duplexSarah Delaney32
2005Association of the cystic fibrosis transmembrane regulator with CAL: structural features and molecular dynamicsDale F. Mierke32
1990Conformations of bombolitins I and III aqueous solutions: circular dichroism, proton NMR, and computer simulation studiesDale F. Mierke32
1995Alteration of Lipid Composition Modulates FcRI Signaling in RBL-2H3 CellsBarbara A. Baird32
2018Comparative membrane proteomics reveals a nonannotated E. coli heat shock proteinSarah Slavoff32
2014Protein engineering of the N-terminus of NEMO: structure stabilization and rescue of IKKβ bindingDale F. Mierke31
1991Dissociation Kinetics of Bivalent Ligand- Immunoglobulin E Aggregates in SolutionBarbara A. Baird31
2013A Photoswitchable Neurotransmitter Analogue Bound to its ReceptorDirk Trauner31
2012Trinucleotide repeat DNA alters structure to minimize the thermodynamic impact of 8-oxo-7,8-dihydroguanineSarah Delaney28
2016Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg–Carbon Bond Cleavage and Metal Binding SpecificityDean E. Wilcox28
1992Rotational Motion of Monomeric and Dimeric Immunoglobulin E-Receptor ComplexesBarbara A. Baird28
1985Segmental Flexibility of Receptor-Bound Immunoglobulin EBarbara A. Baird28
2012CAG/CTG repeats alter affinity for the histone core and positioning of DNA in the nucleosomeSarah Delaney27
2018Deciphering human gut microbiota-nutrient interactions: A role for biochemistry.Emily Balskus27
1993Determination of Fe-CO geometry in the subunits of carbonmonoxy hemoglobin M Boston using femtosecond IR spectroscopyTianquan “Tim” Lian27
2018Mapping the small molecule interactome by mass spectrometryChristina Woo26
2016Characterization of Lipoyl Synthase from Mycobacterium tuberculosisSquire J. Booker26
2018A quantitative model for BicD2/cargo interactionsMegan Kizer25
1997Synthesis, Stereochemistry, and Biological Activity of 1α,23,25-Trihydroxy-24-oxovitamin D3, a Major Natural Metabolite of 1α,25-Dihydroxyvitamin D3Paul Williard25
2019In vitro selection with a site-specifically modified RNA library reveals the binding preferences of N6-methyladenosine (m6A) reader proteinsRalph Kleiner25
2018Ex uno plura: differential labeling of phospholipid biosynthetic pathways with a single bioorthogonal alcoholJeremy M. Baskin24
1997Altered Patterns of Tyrosine Phosphorylation and Syk Activation for Sterically Restricted Cyclic Dimers of IgE-FcRIBarbara A. Baird23
2009IgE Receptor-Mediated Alteration of Membrane-Cytoskeleton Interactions Revealed by Mass Spectrometric Analysis of Detergent-Resistant MembranesBarbara A. Baird22
2021Design of a Superpositively Charged Enzyme: Human Carbonic Anhydrase II Variant with Ferritin Encapsulation and ImmobilizationIvan J. Dmochowski22
2016Transformations of the FeS clusters of the methylthiotransferases MiaB and RimO, detected by direct electrochemistrySquire J. Booker22
2018So Close, Yet Sulfur Away: Opening the Nitrogenase Cofactor Structure Creates a Binding SitePatrick Holland22
2012Schiff base protonation changes in siberian hamster ultraviolet cone pigment photointermediatesE. Chui-Ying Yan22
2019Stuffed methyltransferase catalyzes the penultimate step of pyochelin biosynthesisSquire J. Booker21
2018The Eponymous Cofactors in Cytochrome P460s from Ammonia- Oxidizing Bacteria Are Iron Porphyrinoids Whose Macrocycles Are DibasicKyle M. Lancaster19
2008Binding Mechanisms of PEGylated Ligands Reveal Multiple Effects of the PEG ScaffoldBarbara A. Baird19
2004Correlation Between Catalytic Efficiency and the Transcription Read-Out in Chemical Complementation, a High-Throughput Assay for Enzyme CatalysisVirginia W. Cornish18
2013Single-molecule dynamics and mechanisms of metalloregulators and metallochaperonesPeng Chen18
2020Cytoskeletal drugs modulate off-target protein folding landscapes inside cellsCaitlin Davis18
2008Regulation of the activity of Escherichia coli quinolinate synthase by reversible disulfide-bond formationSquire J. Booker16
1998Studying Receptor-Ligand Interactions Using Encoded Amino Acid ScanningTom Muir16
2020Dimeric stilbene antibiotics target the bacterial cell wall in drug-resistant gram-positive pathogensJason M. Crawford16
2018Microbiota-regulated outcomes of human cancer immunotherapy via the PD-1/PD-L1 axisJason M. Crawford16
2017Mechanistic Insight from Calorimetric Measurements of the Assembly of the Binuclear Metal Active Site of Glycerophosphodiesterase (GpdQ) from Enterobacter aerogenesDean E. Wilcox15
2015Structure-based small molecule modulation of a pre-amyloid state: pharmacological enhancement of iapp membrane-binding and toxicityElizabeth Rhoades15
2020The Heme-Lys Cross-link in Cytochrome P460 Promotes Catalysis by Enforcing Secondary Coordination Sphere ArchitectureKyle M. Lancaster12
2018Labeling for Quantitative Comparison of Imaging Measurements in Vitro and in CellsCaitlin Davis12
2018D-Amino Acid Mediated Translation Arrest Is Modulated by the Identity of the Incoming Aminoacyl-tRNARuben L Gonzalez Jr · Virginia W. Cornish11
2018Functional Characterization of a Condensation Domain That Links Nonribosomal Peptide and Pteridine Biosynthetic Machineries in Photorhabdus luminescensJason M. Crawford11
2012A DNA-Based Nanomechanical Device Used To Characterize the Distortion of DNA by Apo-SoxR ProteinEunsuk Kim10
2023A comparative analysis of the membrane binding and remodeling properties of two related sorting nexin complexes involved in autophagyMichael J. Ragusa10
2021Nucleosome core particles lacking H2B or H3 tails are altered structurally and have differential base excision repair fingerprintsSarah Delaney9
2017Fluorescence Polarization Assay for Small Molecule Screening of FK506 Biosynthesized in 96-Well Microtitre PlatesVirginia W. Cornish9
2019Characterization of a Hybrid Nonribosomal Peptide–Carbohydrate Biosynthetic Pathway in Photorhabdus luminescensJason M. Crawford9
2019The complex between a multi-junction DNA motif, PX-DNA, and T7 endonuclease IMegan Kizer8
2020Quantifying the Relationship between Conformational Dynamics and Enzymatic Activity in Ribonuclease HI HomologuesPaul Robustelli7
1999Interleukin 1 (IL-1) Causes Changes in Lateral and Rotational Mobilities of IL-1 Type I ReceptorsBarbara A. Baird7
2018Reading the RNA CodeRalph Kleiner7
2024Conserved C-Terminal Tail Is Responsible for Membrane Localization and Function of Pseudomonas aeruginosa HemerythrinMichael J. Ragusa6
2018Gut microbiota: Rational manipulation of gut bacterial metalloenzymes provides insights into dysbiosis and inflammation.Emily Balskus6
2023Local Xenon–Protein Interaction Produces Global Conformational Change and Allosteric Inhibition in LysozymeIvan J. Dmochowski6
2025The ERVK3-1 microprotein interacts with the HUSH complexSarah Slavoff6
2017A new nucleoside antibiotic chokes bacterial RNA polymeraseJason M. Crawford6
2018A Yeast Three Hybrid Assay for Metabolic Engineering of Tetracycline DerivativesVirginia W. Cornish4
2025A balancing act: Thymine DNA glycosylase combines sequence and rotational preferences to define lesion excision in the nucleosome core particleSarah Delaney3
2022Kinetic Analysis of the Effect of N-terminal Acetylation in Thymine DNA GlycosylaseSarah Delaney2
1995Effects of Subunit Mutation on the Rotational Dynamics of FcRI, the High Affinity Receptor for IgE, in Transfected cellsBarbara A. Baird2
2023Chemoproteomic profiling of 8-oxoguanosine-sensitive RNA-protein interactionsRalph Kleiner2
2018DNA repair: Unconventional lesions require unconventional repairSeth Herzon2
2016Characterization of a Copper-binding Mutant of the Organomercurial Lyase MerB: Insight into Metal Binding Specificity and Redirected Protein FunctionDean E. Wilcox
2013A Population-Based Experimental Model for Protein Evolution: Effects of Mutation Rate and Selection Stringency on Evolutionary OutcomesDavid R. Liu
2019Taking a STAP at Core Promoter–Transcriptional Cofactor SpecificityBrian Liau
2020Examining the mechanism of phosphite dehydrogenase with quantum mechanical/molecular mechanical free energy simulationsSharon Hammes-Schiffer
2024Proton-coupled electron transfer upon oxidation of tyrosine in a de novo protein: Analysis of proton acceptor candidatesSharon Hammes-Schiffer
2026Comparative simulations of conformational flexibility during radical transport in ribonucleotide reductaseSharon Hammes-Schiffer
2011Water in the active site of ketosteroid isomeraseSharon Hammes-Schiffer
2014Experimental and computational mutagenesis to investigate the positioning of a general base within an enzyme active siteSharon Hammes-Schiffer
2016Molecular dynamics study of twister ribozyme: Role of Mg2+ ions and the hydrogen-bonding network in the active siteSharon Hammes-Schiffer

Citations as counted, before any journal weight: 242 of these 251 works carry a count, and a work with no count is unknown, never a zero.